(32 nodes) Transcription repressor complex network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_015896	WD repeat-containing protein 53. (396 aa)
	APZ42_028349	REST corepressor 3. (474 aa)
	APZ42_033196	Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (794 aa)
	APZ42_018957	F-box/WD repeat-containing TBL1XR1-like protein. (373 aa)
	EOG090X0LUS	Tata-binding protein-associated phosphoprotein dr1. (169 aa)
	EOG090X02QS	Negative elongation factor C/D. (584 aa)
	APZ42_034380	F-box/WD repeat-containing protein TBL1XR1. (492 aa)
	APZ42_020290	Dr1-associated corepressor. (283 aa)
	APZ42_015851	Wd-repeat protein. (392 aa)
	APZ42_016559	Hairless. (452 aa)
	APZ42_022198	Protein lin-37. (250 aa)
	APZ42_012709	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (540 aa)
	APZ42_031956	F-box/WD repeat-containing TBL1XR1-like protein. (735 aa)
	APZ42_019853	Nuclear receptor corepressor. (2125 aa)
	EOG090X0F8Z	Negative elongation factor E. (290 aa)
	APZ42_011136	NTF2-related export protein 1. (137 aa)
	APZ42_031074	Putative Shn zinc finger protein. (1642 aa)
	APZ42_016062	Putative wd-repeat protein. (376 aa)
	APZ42_013677	Histone chaperone asf1. (187 aa)
	APZ42_010980	Protein lin-52. (123 aa)
	APZ42_002704	Recombining binding protein suppressor of hairless. (127 aa)
	APZ42_000788	Putative Recombining binding protein suppressor of hairless. (118 aa)
	APZ42_031733	Mothers against decapentaplegic homolog. (653 aa)
	APZ42_030819	Histone chaperone ASF1A. (193 aa)
	APZ42_029475	Putative Insulinoma-associated protein. (796 aa)
	APZ42_028353	Negative elongation factor A. (544 aa)
	APZ42_025541	Protein lin-9. (720 aa)
	APZ42_023336	Recombining binding protein suppressor of hairless. (577 aa)
	APZ42_021349	Paired amphipathic helix protein Sin3b. (1315 aa)
	APZ42_018622	Negative elongation factor B. (531 aa)
	APZ42_018956	Zinc finger and BTB domain-containing 12-like protein. (530 aa)
	APZ42_003663	Uncharacterized protein. (76 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000788	APZ42_003663	A0A164JDM5	A0A168EL79	Putative Recombining binding protein suppressor of hairless.	Uncharacterized protein.	0.515
APZ42_000788	APZ42_012709	A0A164JDM5	A0A0P5V584	Putative Recombining binding protein suppressor of hairless.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.873
APZ42_000788	APZ42_015851	A0A164JDM5	A0A0P5TDK4	Putative Recombining binding protein suppressor of hairless.	Wd-repeat protein.	0.515
APZ42_000788	APZ42_015896	A0A164JDM5	A0A162NEF8	Putative Recombining binding protein suppressor of hairless.	WD repeat-containing protein 53.	0.515
APZ42_000788	APZ42_016062	A0A164JDM5	A0A162NJW1	Putative Recombining binding protein suppressor of hairless.	Putative wd-repeat protein.	0.515
APZ42_000788	APZ42_016559	A0A164JDM5	A0A0P5TGR3	Putative Recombining binding protein suppressor of hairless.	Hairless.	0.945
APZ42_000788	APZ42_018957	A0A164JDM5	A0A0P5CYP5	Putative Recombining binding protein suppressor of hairless.	F-box/WD repeat-containing TBL1XR1-like protein.	0.515
APZ42_000788	APZ42_019853	A0A164JDM5	A0A0P6A9W1	Putative Recombining binding protein suppressor of hairless.	Nuclear receptor corepressor.	0.804
APZ42_000788	APZ42_021349	A0A164JDM5	A0A164WRJ1	Putative Recombining binding protein suppressor of hairless.	Paired amphipathic helix protein Sin3b.	0.810
APZ42_000788	APZ42_031956	A0A164JDM5	A0A0P5Z1P0	Putative Recombining binding protein suppressor of hairless.	F-box/WD repeat-containing TBL1XR1-like protein.	0.515
APZ42_000788	APZ42_034380	A0A164JDM5	A0A0P5QL58	Putative Recombining binding protein suppressor of hairless.	F-box/WD repeat-containing protein TBL1XR1.	0.515
APZ42_002704	APZ42_003663	A0A164I3H5	A0A168EL79	Recombining binding protein suppressor of hairless.	Uncharacterized protein.	0.515
APZ42_002704	APZ42_012709	A0A164I3H5	A0A0P5V584	Recombining binding protein suppressor of hairless.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.873
APZ42_002704	APZ42_015851	A0A164I3H5	A0A0P5TDK4	Recombining binding protein suppressor of hairless.	Wd-repeat protein.	0.515
APZ42_002704	APZ42_015896	A0A164I3H5	A0A162NEF8	Recombining binding protein suppressor of hairless.	WD repeat-containing protein 53.	0.515
APZ42_002704	APZ42_016062	A0A164I3H5	A0A162NJW1	Recombining binding protein suppressor of hairless.	Putative wd-repeat protein.	0.515
APZ42_002704	APZ42_016559	A0A164I3H5	A0A0P5TGR3	Recombining binding protein suppressor of hairless.	Hairless.	0.945
APZ42_002704	APZ42_018957	A0A164I3H5	A0A0P5CYP5	Recombining binding protein suppressor of hairless.	F-box/WD repeat-containing TBL1XR1-like protein.	0.515
APZ42_002704	APZ42_019853	A0A164I3H5	A0A0P6A9W1	Recombining binding protein suppressor of hairless.	Nuclear receptor corepressor.	0.804
APZ42_002704	APZ42_021349	A0A164I3H5	A0A164WRJ1	Recombining binding protein suppressor of hairless.	Paired amphipathic helix protein Sin3b.	0.810