(76 nodes) Peptidyl-tyrosine phosphorylation network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_020558	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. (416 aa)
	APZ42_016993	Tyrosine-protein kinase. (393 aa)
	APZ42_016095	Tyrosine-protein kinase. (524 aa)
	APZ42_032372	Receptor protein-tyrosine kinase. (1457 aa)
	APZ42_025681	Tyrosine-protein kinase. (712 aa)
	APZ42_022295	Putative Tyrosine-protein kinase transmembrane receptor ror. (512 aa)
	APZ42_022977	Muscle, skeletal receptor tyrosine protein kinase. (1007 aa)
	APZ42_013638	Kinase domain-containing protein, cytoplasmic. (323 aa)
	APZ42_022004	Putative Tyrosine-protein kinase Btk29A. (1513 aa)
	APZ42_023748	Tyrosine-protein kinase. (537 aa)
	APZ42_017492	Putative Discoidin domain-containing receptor 2. (354 aa)
	APZ42_016908	Tyrosine-protein phosphatase non-receptor type 9. (663 aa)
	APZ42_016363	Receptor protein-tyrosine kinase. (898 aa)
	APZ42_020225	Receptor protein-tyrosine kinase. (1213 aa)
	APZ42_019402	Putative Derailed 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. (906 aa)
	APZ42_019289	Fibroblast growth factor receptor. (757 aa)
	APZ42_019316	Tyrosine-protein kinase PR2; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1215 aa)
	APZ42_018316	Tyrosine-protein kinase receptor. (1330 aa)
	APZ42_018038	Inactive tyrosine-protein kinase 7. (672 aa)
	APZ42_020156	Protein kinase domain-containing protein. (1515 aa)
	APZ42_020161	Putative Vascular endothelial growth factor receptor 1. (994 aa)
	APZ42_020116	Putative Receptor-type tyrosine-protein kinase FLT3. (791 aa)
	APZ42_020118	Protein kinase domain-containing protein. (631 aa)
	APZ42_020123	Protein kinase domain-containing protein. (468 aa)
	APZ42_020054	Putative Vascular endothelial growth factor receptor 3. (1011 aa)
	APZ42_019733	Putative Dual specificity tyrosine-phosphorylation-regulated kinase 1B. (1196 aa)
	APZ42_020405	Putative Dual serine/threonine and tyrosine protein kinase. (1012 aa)
	APZ42_020568	Tyrosine-protein kinase. (587 aa)
	APZ42_021685	Tyrosine-protein kinase JAK1. (1217 aa)
	EOG090X0LFN	EOG090X0LFN. (368 aa)
	APZ42_022296	Putative NT-3 growth factor receptor. (515 aa)
	APZ42_023086	Discoidin domain receptor. (253 aa)
	APZ42_024303	Putative Inactive tyrosine-protein kinase 7. (1141 aa)
	APZ42_024111	Angiopoietin-1 receptor-like protein. (1077 aa)
	APZ42_024022	Putative Tyrosine-protein kinase transmembrane receptor ror. (586 aa)
	APZ42_024348	Putative Tyrosine-protein kinase receptor. (220 aa)
	APZ42_024375	Ephrin type-A receptor 4-A. (709 aa)
	APZ42_024459	Tyrosine-protein kinase receptor. (773 aa)
	APZ42_024514	Fibroblast growth factor receptor 1-like protein. (531 aa)
	APZ42_024507	Fibroblast growth factor receptor 1-like protein. (708 aa)
	APZ42_024857	Receptor protein-tyrosine kinase. (1535 aa)
	APZ42_025310	Uncharacterized protein. (661 aa)
	APZ42_025854	Uncharacterized protein. (884 aa)
	APZ42_026332	Ephrin type-A receptor 4-A. (177 aa)
	APZ42_026368	Discoidin domain-containing receptor 2. (443 aa)
	APZ42_026370	Discoidin domain-containing receptor 2. (111 aa)
	APZ42_027377	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (894 aa)
	APZ42_029542	Mast/stem cell growth factor receptor Kit. (903 aa)
	APZ42_029345	Tyrosine-protein phosphatase. (813 aa)
	APZ42_029966	Fibroblast growth factor receptor 1/sw-like protein. (468 aa)
	APZ42_030370	Protein kinase domain-containing protein. (528 aa)
	APZ42_030441	Tyrosine-protein kinase STYK1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1155 aa)
	APZ42_030529	Guanylate cyclase. (384 aa)
	APZ42_031468	Protein kinase domain-containing protein. (323 aa)
	APZ42_031732	Tyrosine-protein kinase. (733 aa)
	APZ42_032339	Ret oncogene; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1114 aa)
	APZ42_034173	Discoidin domain-containing receptor 2. (921 aa)
	APZ42_000652	Uncharacterized protein. (215 aa)
	APZ42_001422	Discoidin domain-containing receptor 2. (158 aa)
	APZ42_001659	Tyrosine-protein kinase receptor. (151 aa)
	APZ42_002058	Serine/threonine-protein kinase minibrain. (266 aa)
	APZ42_011614	Tyrosine-protein kinase STYK1. (1055 aa)
	APZ42_011191	Putative Tyrosine-protein kinase Fps85D. (917 aa)
	APZ42_013355	Focal adhesion kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1337 aa)
	APZ42_014075	Protein kinase domain-containing protein. (325 aa)
	APZ42_015553	Putative Discoidin domain receptor. (892 aa)
	APZ42_016105	Tyrosine-protein kinase. (515 aa)
	APZ42_015829	Tyrosine-protein kinase receptor. (1304 aa)
	APZ42_016056	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (863 aa)
	APZ42_015832	Tyrosine-protein kinase receptor. (1310 aa)
	APZ42_024505	Fibroblast growth factor receptor 1-like protein. (653 aa)
	APZ42_024651	Putative Tyrosine-protein phosphatase non-receptor type 1. (512 aa)
	APZ42_019958	Uncharacterized protein. (933 aa)
	APZ42_018129	Tyrosine-protein kinase receptor. (2351 aa)
	APZ42_019977	Ig-like domain-containing protein. (264 aa)
	APZ42_019921	Protein kinase domain-containing protein. (749 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000652	APZ42_001659	A0A164JH90	A0A164IUD0	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.566
APZ42_000652	APZ42_011614	A0A164JH90	A0A162SVB6	Uncharacterized protein.	Tyrosine-protein kinase STYK1.	0.501
APZ42_000652	APZ42_013355	A0A164JH90	A0A162QXM8	Uncharacterized protein.	Focal adhesion kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.598
APZ42_000652	APZ42_015829	A0A164JH90	A0A162NED6	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.566
APZ42_000652	APZ42_015832	A0A164JH90	A0A162NEC9	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.566
APZ42_000652	APZ42_016095	A0A164JH90	A0A0P6H5F8	Uncharacterized protein.	Tyrosine-protein kinase.	0.588
APZ42_000652	APZ42_016105	A0A164JH90	A0A162NLR5	Uncharacterized protein.	Tyrosine-protein kinase.	0.588
APZ42_000652	APZ42_016993	A0A164JH90	A0A0P6HX98	Uncharacterized protein.	Tyrosine-protein kinase.	0.584
APZ42_000652	APZ42_018038	A0A164JH90	A0A164ZHV0	Uncharacterized protein.	Inactive tyrosine-protein kinase 7.	0.589
APZ42_000652	APZ42_018129	A0A164JH90	A0A162CIF0	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.546
APZ42_000652	APZ42_018316	A0A164JH90	A0A164Z3T8	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.546
APZ42_000652	APZ42_019289	A0A164JH90	A0A164YGT7	Uncharacterized protein.	Fibroblast growth factor receptor.	0.538
APZ42_000652	APZ42_019402	A0A164JH90	A0A164Y575	Uncharacterized protein.	Putative Derailed 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.538
APZ42_000652	APZ42_020558	A0A164JH90	A0A162CBY6	Uncharacterized protein.	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.578
APZ42_000652	APZ42_020568	A0A164JH90	A0A164X7E9	Uncharacterized protein.	Tyrosine-protein kinase.	0.578
APZ42_000652	APZ42_022295	A0A164JH90	A0A0P5T1Y6	Uncharacterized protein.	Putative Tyrosine-protein kinase transmembrane receptor ror.	0.501
APZ42_000652	APZ42_022296	A0A164JH90	A0A164VE42	Uncharacterized protein.	Putative NT-3 growth factor receptor.	0.501
APZ42_000652	APZ42_022977	A0A164JH90	A0A0P5NZ85	Uncharacterized protein.	Muscle, skeletal receptor tyrosine protein kinase.	0.502
APZ42_000652	APZ42_023748	A0A164JH90	A0A0N8DE06	Uncharacterized protein.	Tyrosine-protein kinase.	0.588
APZ42_000652	APZ42_024022	A0A164JH90	A0A164UE11	Uncharacterized protein.	Putative Tyrosine-protein kinase transmembrane receptor ror.	0.501