STRINGSTRING
APZ42_030477 APZ42_030477 APZ42_020282 APZ42_020282 APZ42_019031 APZ42_019031 APZ42_019974 APZ42_019974 APZ42_028561 APZ42_028561 APZ42_030032 APZ42_030032 APZ42_034142 APZ42_034142 APZ42_001106 APZ42_001106 APZ42_007937 APZ42_007937 APZ42_011472 APZ42_011472 APZ42_014162 APZ42_014162 APZ42_014559 APZ42_014559 APZ42_029139 APZ42_029139 APZ42_024014 APZ42_024014 APZ42_020180 APZ42_020180 APZ42_012709 APZ42_012709 APZ42_021069 APZ42_021069 APZ42_026807 APZ42_026807
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_030477NAD-dependent protein deacetylase sirtuin-2. (336 aa)
APZ42_020282Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1140 aa)
APZ42_019031Poly glycohydrolase ARH3. (355 aa)
APZ42_019974NAD-dependent protein deacylase; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo. (276 aa)
APZ42_028561Putative Histone deacetylase HDAC6 protein. (1041 aa)
APZ42_030032Putative Hdac6. (446 aa)
APZ42_034142N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase. (304 aa)
APZ42_001106Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase. (199 aa)
APZ42_007937Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase. (93 aa)
APZ42_011472NAD-dependent deacetylase sirtuin-6. (416 aa)
APZ42_014162Putative Histone deacetylase silent information regulator protein Sir2. (600 aa)
APZ42_014559Histone deacetylase 6-like protein. (313 aa)
APZ42_029139Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase. (269 aa)
APZ42_024014N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family. (411 aa)
APZ42_020180Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (392 aa)
APZ42_012709Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (540 aa)
APZ42_021069Hdac6. (57 aa)
APZ42_026807Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (434 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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