(11 nodes) Filopodium network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_016201	Moesin/ezrin/radixin 1. (155 aa)
	APZ42_021922	Putative Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. (184 aa)
	APZ42_023488	Neuroglian. (1262 aa)
	APZ42_025668	Putative Neurabin-1. (526 aa)
	APZ42_030114	Ena/VASP-like protein. (436 aa)
	APZ42_031488	Extra bases protein. (418 aa)
	APZ42_015074	Microtubule-actin cross-linking factor 1. (5007 aa)
	APZ42_014248	Ras-related protein Rab-35. (201 aa)
	APZ42_012156	FAM206 family protein. (171 aa)
	APZ42_028579	TBC1 domain family member 10A. (470 aa)
	APZ42_022072	Axonemal dynein light intermediate polypeptide 1. (273 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_014248	APZ42_028579	A0A0P5ZIH4	A0A0P5U1P6	Ras-related protein Rab-35.	TBC1 domain family member 10A.	0.873
APZ42_015074	APZ42_028579	A0A162P6X1	A0A0P5U1P6	Microtubule-actin cross-linking factor 1.	TBC1 domain family member 10A.	0.577
APZ42_016201	APZ42_023488	A0A165AJD0	A0A164UXW4	Moesin/ezrin/radixin 1.	Neuroglian.	0.441
APZ42_023488	APZ42_016201	A0A164UXW4	A0A165AJD0	Neuroglian.	Moesin/ezrin/radixin 1.	0.441
APZ42_028579	APZ42_014248	A0A0P5U1P6	A0A0P5ZIH4	TBC1 domain family member 10A.	Ras-related protein Rab-35.	0.873
APZ42_028579	APZ42_015074	A0A0P5U1P6	A0A162P6X1	TBC1 domain family member 10A.	Microtubule-actin cross-linking factor 1.	0.577