STRINGSTRING
APZ42_025707 APZ42_025707 APZ42_004669 APZ42_004669 APZ42_027139 APZ42_027139 APZ42_027135 APZ42_027135 APZ42_011508 APZ42_011508 EOG090X05RK EOG090X05RK APZ42_012615 APZ42_012615 APZ42_033654 APZ42_033654
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_025707Uncharacterized protein. (1156 aa)
APZ42_004669Ras GTP-binding protein Rho1. (41 aa)
APZ42_027139Putative Rho guanine nucleotide exchange factor. (808 aa)
APZ42_027135Protein vav-like protein. (1151 aa)
APZ42_011508Actin-related protein 3; Belongs to the actin family. (420 aa)
EOG090X05RKActin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (374 aa)
APZ42_012615Rho-related GTP-binding protein RhoF. (223 aa)
APZ42_033654Unconventional myosin-VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1246 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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