STRINGSTRING
APZ42_017650 APZ42_017650 APZ42_012709 APZ42_012709 EOG090X0B66 EOG090X0B66 APZ42_029459 APZ42_029459 APZ42_031506 APZ42_031506 APZ42_022198 APZ42_022198 APZ42_014663 APZ42_014663 APZ42_020413 APZ42_020413 APZ42_011612 APZ42_011612
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_017650Histone-binding protein RBBP4. (428 aa)
APZ42_012709Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (540 aa)
EOG090X0B66Transcription factor. (447 aa)
APZ42_029459Transcription factor E2F4. (283 aa)
APZ42_031506Lin-54. (893 aa)
APZ42_022198Protein lin-37. (250 aa)
APZ42_014663Retinoblastoma family protein. (1077 aa)
APZ42_020413Lethalmalignant brain tumor protein 3. (989 aa)
APZ42_011612Putative Myb-related protein B. (823 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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