(54 nodes) Nuclear membrane network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_021012	Putative Macoilin. (811 aa)
	APZ42_014891	Chloride channel CLIC 1-like protein. (538 aa)
	APZ42_024166	Putative Sentrin-specific protease. (303 aa)
	APZ42_030445	Longevity assurance factor 1 lag1. (295 aa)
	APZ42_019446	Serine/threonine-protein kinase Genghis Khan. (624 aa)
	APZ42_018525	Acylamino-acid-releasing enzyme. (276 aa)
	APZ42_018312	Muscle-specific protein. (5333 aa)
	APZ42_017958	Nucleoprotein TPR. (2316 aa)
	APZ42_017648	Exportin-1. (1075 aa)
	APZ42_026528	Longevity assurance protein. (393 aa)
	APZ42_019808	Phosphatidylinositol transfer protein alpha. (271 aa)
	APZ42_034489	Torsin-1A-interacting protein. (364 aa)
	APZ42_022106	Putative Glycosylphosphatidylinositol anchor attachment 1 protein. (621 aa)
	APZ42_017206	Phosphatidylinositol glycan anchor biosynthesis class U protein. (426 aa)
	APZ42_034488	Putative Torsin-1A-interacting protein 1. (266 aa)
	APZ42_017611	Lamina-associated polypeptide. (330 aa)
	APZ42_033086	Sentrin-specific protease. (677 aa)
	APZ42_019871	Cell cycle checkpoint control protein; Belongs to the rad9 family. (404 aa)
	APZ42_016558	Nuclear envelope membrane protein. (291 aa)
	APZ42_018104	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (305 aa)
	APZ42_030439	Longevity assurance factor 1 lag1. (371 aa)
	APZ42_030202	Putative Nuclear pore complex protein Nup98-Nup96. (155 aa)
	APZ42_030570	Uncharacterized protein. (428 aa)
	APZ42_031202	CS domain-containing protein. (170 aa)
	APZ42_031762	E3 SUMO-protein ligase RanBP2. (2719 aa)
	APZ42_032786	Inner nuclear membrane Man1-like protein. (654 aa)
	APZ42_034075	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family. (779 aa)
	APZ42_034064	GFA domain-containing protein. (142 aa)
	APZ42_034487	Putative Torsin-1A-interacting protein 2. (374 aa)
	APZ42_002518	Putative 7-dehydrocholesterol reductase. (340 aa)
	APZ42_010944	CLIP-associating protein. (805 aa)
	APZ42_012476	Acylamino-acid-releasing enzyme. (370 aa)
	APZ42_013351	Sterol regulatory element-binding protein 1. (1161 aa)
	APZ42_013669	ADP-ribose pyrophosphatase, mitochondrial. (290 aa)
	APZ42_014162	Putative Histone deacetylase silent information regulator protein Sir2. (600 aa)
	APZ42_015592	Muscle-specific protein. (421 aa)
	APZ42_015656	Putative Transcription initiation factor TFIID subunit 3. (928 aa)
	APZ42_015883	ATP-dependent RNA Helicase kurz. (1212 aa)
	APZ42_025180	Putative Bifocal. (1125 aa)
	APZ42_018369	LBR_tudor domain-containing protein. (208 aa)
	APZ42_021633	All-trans-retinol 13,14-reductase. (632 aa)
	APZ42_001074	General transcription factor 3C Polypeptide 3. (49 aa)
	APZ42_029561	Small ubiquitin-related modifier 1. (129 aa)
	APZ42_015095	UPF0197 transmembrane protein. (80 aa)
	APZ42_029763	KASH domain-containing protein. (1068 aa)
	APZ42_026207	7,8-dihydro-8-oxoguanine triphosphatase. (157 aa)
	APZ42_029205	Nucleoporin p58/p45. (480 aa)
	APZ42_026610	Putative SUN domain-containing protein 1. (627 aa)
	APZ42_022865	Putative Bruno-3. (377 aa)
	APZ42_020656	Phosphatidylinositol transfer protein beta. (267 aa)
	APZ42_020284	Dumpy-19 protein. (713 aa)
	APZ42_019953	GPI transamidase component PIG-T. (548 aa)
	APZ42_018886	All-trans-retinol 13,14-reductase. (635 aa)
	APZ42_018888	Uncharacterized protein. (474 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002518	APZ42_032786	A0A164I7R6	A0A164LWJ8	Putative 7-dehydrocholesterol reductase.	Inner nuclear membrane Man1-like protein.	0.753
APZ42_010944	APZ42_031762	A0A162TBN6	A0A164MMU2	CLIP-associating protein.	E3 SUMO-protein ligase RanBP2.	0.430
APZ42_012476	APZ42_018525	A0A162RVZ6	A0A164Z1N4	Acylamino-acid-releasing enzyme.	Acylamino-acid-releasing enzyme.	0.490
APZ42_013351	APZ42_014162	A0A162QXQ0	A0A162Q0V9	Sterol regulatory element-binding protein 1.	Putative Histone deacetylase silent information regulator protein Sir2.	0.785
APZ42_014162	APZ42_013351	A0A162Q0V9	A0A162QXQ0	Putative Histone deacetylase silent information regulator protein Sir2.	Sterol regulatory element-binding protein 1.	0.785
APZ42_014162	APZ42_017611	A0A162Q0V9	A0A0P5T845	Putative Histone deacetylase silent information regulator protein Sir2.	Lamina-associated polypeptide.	0.445
APZ42_014162	APZ42_025180	A0A162Q0V9	A0A162DDQ7	Putative Histone deacetylase silent information regulator protein Sir2.	Putative Bifocal.	0.445
APZ42_015592	APZ42_018312	A0A162NUG1	A0A164Z3Y8	Muscle-specific protein.	Muscle-specific protein.	0.815
APZ42_015592	APZ42_026610	A0A162NUG1	A0A164S3V6	Muscle-specific protein.	Putative SUN domain-containing protein 1.	0.888
APZ42_015592	APZ42_029763	A0A162NUG1	A0A164PB27	Muscle-specific protein.	KASH domain-containing protein.	0.476
APZ42_015883	APZ42_031762	A0A162NF76	A0A164MMU2	ATP-dependent RNA Helicase kurz.	E3 SUMO-protein ligase RanBP2.	0.494
APZ42_017206	APZ42_019953	A0A0P5UC41	A0A164XVE5	Phosphatidylinositol glycan anchor biosynthesis class U protein.	GPI transamidase component PIG-T.	0.999
APZ42_017206	APZ42_022106	A0A0P5UC41	A0A0P5XMC8	Phosphatidylinositol glycan anchor biosynthesis class U protein.	Putative Glycosylphosphatidylinositol anchor attachment 1 protein.	0.999
APZ42_017611	APZ42_014162	A0A0P5T845	A0A162Q0V9	Lamina-associated polypeptide.	Putative Histone deacetylase silent information regulator protein Sir2.	0.445
APZ42_017648	APZ42_030202	A0A164ZZN0	A0A164NZ61	Exportin-1.	Putative Nuclear pore complex protein Nup98-Nup96.	0.902
APZ42_017648	APZ42_031762	A0A164ZZN0	A0A164MMU2	Exportin-1.	E3 SUMO-protein ligase RanBP2.	0.977
APZ42_017958	APZ42_018104	A0A164ZGU0	A0A0P5DW53	Nucleoprotein TPR.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.844
APZ42_017958	APZ42_026610	A0A164ZGU0	A0A164S3V6	Nucleoprotein TPR.	Putative SUN domain-containing protein 1.	0.720
APZ42_017958	APZ42_029205	A0A164ZGU0	A0A164PUN4	Nucleoprotein TPR.	Nucleoporin p58/p45.	0.756
APZ42_017958	APZ42_029561	A0A164ZGU0	A0A0P6GQ96	Nucleoprotein TPR.	Small ubiquitin-related modifier 1.	0.648