STRINGSTRING
APZ42_019575 APZ42_019575 APZ42_019395 APZ42_019395 APZ42_020471 APZ42_020471 APZ42_021596 APZ42_021596 APZ42_027161 APZ42_027161 APZ42_034051 APZ42_034051 APZ42_015461 APZ42_015461 APZ42_028867 APZ42_028867
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_019575Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (842 aa)
APZ42_019395Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family. (1087 aa)
APZ42_020471Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. (281 aa)
APZ42_021596Vacuolar protein sorting-associated protein 18. (921 aa)
APZ42_027161RING-type domain-containing protein. (1332 aa)
APZ42_034051Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. (520 aa)
APZ42_015461Transforming growth factor-beta receptor-associated protein. (822 aa)
APZ42_028867Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. (597 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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