(81 nodes) Positive regulation of cellular amide metabolic process network (Daphnia magna)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	APZ42_034125	A-kinase anchor protein 1, mitochondrial. (496 aa)
	APZ42_018630	Spaetzle. (410 aa)
	APZ42_013696	ATP-binding cassette sub-family F member 2. (684 aa)
	APZ42_026622	85/88 kDa calcium-independent phospholipase A2. (799 aa)
	APZ42_012800	Polymerase delta-interacting protein. (388 aa)
	APZ42_028680	Zinc phosphodiesterase ELAC protein. (820 aa)
	APZ42_026672	Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity. (334 aa)
	APZ42_033695	Eukaryotic translation initiation factor 2 subunit 3. (545 aa)
	APZ42_017061	DNA-directed RNA polymerase II subunit RPB7. (172 aa)
	APZ42_022515	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (566 aa)
	APZ42_028034	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (129 aa)
	APZ42_005971	Translation factor GUF1. (100 aa)
	APZ42_001241	DNA-directed RNA polymerase. (144 aa)
	APZ42_018480	Ubiquinol-cytochrome-c reductase complex assembly factor 2. (172 aa)
	APZ42_029428	Putative Sentrin-specific Protease. (944 aa)
	APZ42_032191	BTB domain-containing protein. (403 aa)
	APZ42_025786	CCHC-type zinc finger protein. (288 aa)
	APZ42_018189	Putative Vacuolar protein sorting-associated protein VTA1. (698 aa)
	APZ42_018987	Polyadenylate-binding protein-interacting protein. (423 aa)
	APZ42_019004	Poly [ADP-ribose] polymerase. (1009 aa)
	APZ42_019523	Polyglutamine-binding protein 1. (277 aa)
	APZ42_019863	Putative Longitudinals lackingprotein. (558 aa)
	APZ42_019730	La-related 4B-like protein. (1025 aa)
	APZ42_020950	DNA-directed RNA polymerase. (701 aa)
	APZ42_020929	Zinc finger and BTB domain-containing protein 44. (430 aa)
	APZ42_022760	Mitochondrial ribonuclease P protein 1. (434 aa)
	APZ42_022945	DNA-directed RNA polymerase-like protein. (118 aa)
	APZ42_024213	Putative JmjC domain-containing protein 4. (356 aa)
	APZ42_024747	Fragile X mental retardation Syndrome-related protein. (637 aa)
	APZ42_026050	Zinc finger protein ush. (1221 aa)
	APZ42_026502	GTP-binding protein Rheb. (185 aa)
	APZ42_026487	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (621 aa)
	APZ42_026553	RNA pseudouridylate synthase domain-containing protein 4. (359 aa)
	APZ42_026864	28S ribosomal protein S27. (464 aa)
	APZ42_026737	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (683 aa)
	APZ42_027369	Eukaryotic translation initiation factor 5A. (160 aa)
	APZ42_027341	Stimulator of interferon genes protein. (389 aa)
	APZ42_028550	DNA-directed RNA polymerase. (281 aa)
	APZ42_028913	Dodeca-satellite-binding protein 1. (1236 aa)
	APZ42_029323	Putative F58A4.6 protein. (184 aa)
	APZ42_030263	Zinc finger and BTB domain-containing protein 18. (416 aa)
	APZ42_030531	Williams-Beuren Syndrome chromosomal region 16 protein. (289 aa)
	APZ42_030481	Putative Poor gastrulation. (716 aa)
	APZ42_030952	Glutathione synthetase. (373 aa)
	APZ42_033028	mTERF domain-containing protein. (360 aa)
	APZ42_000259	Williams-Beuren Syndrome chromosomal region 16 protein. (144 aa)
	APZ42_001344	DNA-directed RNA polymerase. (178 aa)
	APZ42_001346	DNA-directed RNA polymerase. (212 aa)
	APZ42_003205	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (137 aa)
	APZ42_004272	Putative GTP-binding protein TypA/BipA. (182 aa)
	APZ42_005275	RNA polymerase sigma factor rpoD. (212 aa)
	APZ42_007546	40S ribosomal protein S9. (70 aa)
	APZ42_011797	Putative DAZ-associated protein 1. (461 aa)
	APZ42_011331	LA-related protein 1. (1144 aa)
	APZ42_012150	Smg4_UPF3 domain-containing protein. (443 aa)
	APZ42_012032	Putative Transcription elongation factor SPT6. (2295 aa)
	APZ42_012662	Mitogen-activated protein kinase kinase kinase 7-interacting protein 2. (456 aa)
	APZ42_016016	Receptor-interacting serine/threonine-protein kinase. (216 aa)
	APZ42_012790	40S ribosomal protein S9. (121 aa)
	APZ42_013134	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit Delta; Belongs to the PI3/PI4-kinase family. (658 aa)
	APZ42_013130	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family. (1116 aa)
	APZ42_013272	ATP-binding cassette sub-family F member 3. (965 aa)
	APZ42_013907	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (454 aa)
	APZ42_015266	RNA-binding protein orb2. (193 aa)
	APZ42_014948	Putative Pumilio. (1214 aa)
	APZ42_022056	Inhibitor of nuclear factor kappa-B kinase subunit beta. (742 aa)
	APZ42_014856	Diphthine methyl ester synthase. (275 aa)
	APZ42_028036	ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (458 aa)
	APZ42_028288	CUGBP Elav family member. (532 aa)
	APZ42_013591	Peroxisomal biogenesis factor. (303 aa)
	APZ42_013652	MIF4G domain-containing protein. (458 aa)
	APZ42_024546	Uncharacterized protein. (927 aa)
	APZ42_017653	Putative PAX-interacting protein 1. (1621 aa)
	APZ42_028206	Lola-like protein. (399 aa)
	APZ42_014830	KH domain-containing protein. (421 aa)
	APZ42_016881	RWD domain-containing protein. (286 aa)
	APZ42_017805	Med25 domain-containing protein. (1029 aa)
	APZ42_018629	Beadex/dlmo protein. (540 aa)
	APZ42_023485	Putative Ankyrin repeat domain-containing protein 19. (1016 aa)
	APZ42_022910	Longitudinals lacking protein. (385 aa)
	APZ42_024483	RNA pseudouridylate synthase domain-containing protein 4. (527 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000259	APZ42_030531	A0A164JSZ9	A0A164NKP8	Williams-Beuren Syndrome chromosomal region 16 protein.	Williams-Beuren Syndrome chromosomal region 16 protein.	0.493
APZ42_001241	APZ42_001344	A0A162C808	A0A164J1Q8	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.935
APZ42_001241	APZ42_001346	A0A162C808	A0A164J1Q0	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.924
APZ42_001241	APZ42_003205	A0A162C808	A0A164HQQ6	DNA-directed RNA polymerase.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.686
APZ42_001241	APZ42_007546	A0A162C808	A0A164F828	DNA-directed RNA polymerase.	40S ribosomal protein S9.	0.686
APZ42_001241	APZ42_012790	A0A162C808	A0A162RD04	DNA-directed RNA polymerase.	40S ribosomal protein S9.	0.686
APZ42_001241	APZ42_013907	A0A162C808	A0A162QDT0	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.938
APZ42_001241	APZ42_020950	A0A162C808	A0A164X4S9	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.943
APZ42_001241	APZ42_028550	A0A162C808	A0A164QEP3	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.935
APZ42_001241	APZ42_028680	A0A162C808	A0A0P5Z1F6	DNA-directed RNA polymerase.	Zinc phosphodiesterase ELAC protein.	0.437
APZ42_001344	APZ42_001241	A0A164J1Q8	A0A162C808	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.935
APZ42_001344	APZ42_001346	A0A164J1Q8	A0A164J1Q0	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.919
APZ42_001344	APZ42_003205	A0A164J1Q8	A0A164HQQ6	DNA-directed RNA polymerase.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.686
APZ42_001344	APZ42_007546	A0A164J1Q8	A0A164F828	DNA-directed RNA polymerase.	40S ribosomal protein S9.	0.686
APZ42_001344	APZ42_012790	A0A164J1Q8	A0A162RD04	DNA-directed RNA polymerase.	40S ribosomal protein S9.	0.686
APZ42_001344	APZ42_020950	A0A164J1Q8	A0A164X4S9	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.944
APZ42_001344	APZ42_028550	A0A164J1Q8	A0A164QEP3	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.947
APZ42_001344	APZ42_028680	A0A164J1Q8	A0A0P5Z1F6	DNA-directed RNA polymerase.	Zinc phosphodiesterase ELAC protein.	0.437
APZ42_001346	APZ42_001241	A0A164J1Q0	A0A162C808	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.924
APZ42_001346	APZ42_001344	A0A164J1Q0	A0A164J1Q8	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.919