(63 nodes) Protein localization to nucleus network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_026668	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (915 aa)
	APZ42_017606	Importin-9. (1027 aa)
	APZ42_017616	Putative Transportin-3. (702 aa)
	APZ42_017958	Nucleoprotein TPR. (2316 aa)
	APZ42_019004	Poly [ADP-ribose] polymerase. (1009 aa)
	APZ42_019609	Nuclear pore complex protein Nup88. (735 aa)
	APZ42_020255	Transportin-1. (656 aa)
	APZ42_020437	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (177 aa)
	APZ42_022066	Putative Importin subunit beta-1. (588 aa)
	APZ42_024654	Putative Transcriptional factor Homothorax protein. (285 aa)
	APZ42_024904	Importin-4. (1079 aa)
	APZ42_025288	Transportin-1. (264 aa)
	APZ42_025688	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (413 aa)
	APZ42_026406	Nucleoporin 154kD, isoform A. (338 aa)
	APZ42_026545	Nuclear pore complex protein Nup155. (588 aa)
	APZ42_027333	Nuclear pore complex protein Nup205. (1838 aa)
	APZ42_028384	Importin subunit beta. (888 aa)
	APZ42_029021	Importin subunit alpha; Belongs to the importin alpha family. (519 aa)
	APZ42_030202	Putative Nuclear pore complex protein Nup98-Nup96. (155 aa)
	APZ42_030621	Nuclear pore complex protein Nup160. (1379 aa)
	APZ42_031077	Nuclear pore complex Nup153-like protein. (1496 aa)
	APZ42_031762	E3 SUMO-protein ligase RanBP2. (2719 aa)
	APZ42_032187	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (286 aa)
	APZ42_034487	Putative Torsin-1A-interacting protein 2. (374 aa)
	APZ42_000930	Nuclear pore complex protein Nup155. (248 aa)
	APZ42_001666	Transportin-3. (287 aa)
	APZ42_007055	Nuclear pore complex protein Nup155. (121 aa)
	APZ42_007228	Transportin-3. (86 aa)
	APZ42_009651	Transportin-3. (131 aa)
	APZ42_010899	Nucleoporin 98-96kD-like protein. (1655 aa)
	APZ42_011031	D-Importin 7/RanBP7. (1041 aa)
	APZ42_012129	Importin-5. (389 aa)
	APZ42_012130	Importin-5. (663 aa)
	APZ42_013306	Putative Exportin-2. (1650 aa)
	APZ42_013510	Nuclear pore complex protein Nup155. (224 aa)
	APZ42_013766	Putative Nuclear pore complex protein Nup98-Nup96. (224 aa)
	APZ42_014606	STAGA complex 65 subunit gamma. (357 aa)
	APZ42_015656	Putative Transcription initiation factor TFIID subunit 3. (928 aa)
	EOG090X07N7	SEC13 protein; Belongs to the WD repeat SEC13 family. (311 aa)
	APZ42_027868	Importin subunit alpha; Belongs to the importin alpha family. (521 aa)
	APZ42_011136	NTF2-related export protein 1. (137 aa)
	APZ42_011311	Uncharacterized protein. (438 aa)
	APZ42_000921	Nuclear pore complex protein Nup155. (202 aa)
	APZ42_015077	Nuclear pore protein. (825 aa)
	APZ42_023463	Protein Hikeshi. (200 aa)
	APZ42_013353	Lamin-A; Belongs to the intermediate filament family. (599 aa)
	APZ42_018670	Karyopherin importin beta. (885 aa)
	APZ42_011391	Inhibitor of growth protein. (320 aa)
	APZ42_022409	Nuclear pore complex protein Nup133. (1116 aa)
	APZ42_034489	Torsin-1A-interacting protein. (364 aa)
	APZ42_014238	Poly(ADP-ribose) glycohydrolase. (622 aa)
	APZ42_026376	Importin-11. (988 aa)
	APZ42_012380	Importin subunit alpha-1. (534 aa)
	APZ42_023435	Nuclear pore membrane glycoprotein 210. (1876 aa)
	APZ42_034488	Putative Torsin-1A-interacting protein 1. (266 aa)
	APZ42_011713	Importin-13. (984 aa)
	APZ42_022227	Nuclear pore complex protein Nup98-Nup96. (1843 aa)
	APZ42_026626	Regulator of chromosome condensation. (621 aa)
	APZ42_018104	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (305 aa)
	APZ42_034337	Putative Nuclear pore glycoprotein p62. (787 aa)
	APZ42_021847	Nuclear pore complex protein Nup54. (580 aa)
	APZ42_023172	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (642 aa)
	APZ42_023834	Nuclear pore complex protein Nup50. (443 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000921	APZ42_000930	A0A162C8L9	A0A164JAB6	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup155.	0.578
APZ42_000921	APZ42_007055	A0A162C8L9	A0A164FJF0	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup155.	0.467
APZ42_000921	APZ42_010899	A0A162C8L9	A0A162T9B4	Nuclear pore complex protein Nup155.	Nucleoporin 98-96kD-like protein.	0.900
APZ42_000921	APZ42_011031	A0A162C8L9	A0A162T4Y0	Nuclear pore complex protein Nup155.	D-Importin 7/RanBP7.	0.642
APZ42_000921	APZ42_011136	A0A162C8L9	A0A162D018	Nuclear pore complex protein Nup155.	NTF2-related export protein 1.	0.614
APZ42_000921	APZ42_013306	A0A162C8L9	A0A162QWR0	Nuclear pore complex protein Nup155.	Putative Exportin-2.	0.417
APZ42_000921	APZ42_013766	A0A162C8L9	A0A162QIP0	Nuclear pore complex protein Nup155.	Putative Nuclear pore complex protein Nup98-Nup96.	0.836
APZ42_000921	APZ42_015077	A0A162C8L9	A0A0P6GRK8	Nuclear pore complex protein Nup155.	Nuclear pore protein.	0.923
APZ42_000921	APZ42_017958	A0A162C8L9	A0A164ZGU0	Nuclear pore complex protein Nup155.	Nucleoprotein TPR.	0.749
APZ42_000921	APZ42_018104	A0A162C8L9	A0A0P5DW53	Nuclear pore complex protein Nup155.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.935
APZ42_000921	APZ42_019609	A0A162C8L9	A0A164YAI6	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup88.	0.875
APZ42_000921	APZ42_020437	A0A162C8L9	A0A164XI82	Nuclear pore complex protein Nup155.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.606
APZ42_000921	APZ42_021847	A0A162C8L9	A0A0P5BVK0	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup54.	0.911
APZ42_000921	APZ42_022227	A0A162C8L9	A0A0P5EGA2	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup98-Nup96.	0.836
APZ42_000921	APZ42_022409	A0A162C8L9	A0A0P5YWY4	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup133.	0.915
APZ42_000921	APZ42_023172	A0A162C8L9	A0A0N8CSH8	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.907
APZ42_000921	APZ42_023435	A0A162C8L9	A0A0P5US12	Nuclear pore complex protein Nup155.	Nuclear pore membrane glycoprotein 210.	0.832
APZ42_000921	APZ42_023463	A0A162C8L9	A0A0P6E4V1	Nuclear pore complex protein Nup155.	Protein Hikeshi.	0.569
APZ42_000921	APZ42_023834	A0A162C8L9	A0A0N8AGT5	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup50.	0.713
APZ42_000921	APZ42_026406	A0A162C8L9	A0A164S642	Nuclear pore complex protein Nup155.	Nucleoporin 154kD, isoform A.	0.497