(14 nodes) Somatic stem cell population maintenance network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_016559	Hairless. (452 aa)
	APZ42_023092	Axin-1. (855 aa)
	APZ42_031773	Neurogenic protein mastermind. (1345 aa)
	APZ42_019260	Putative Ubiquitin carboxyl-terminal hydrolase 36; Belongs to the peptidase C19 family. (895 aa)
	APZ42_026322	Putative Segment polarity protein dishevelled. (699 aa)
	APZ42_014841	Cyclin E-like protein; Belongs to the cyclin family. (458 aa)
	APZ42_015434	Putative Zinc finger E-box-binding homeobox 2. (217 aa)
	APZ42_011793	Uncharacterized protein. (2828 aa)
	APZ42_002871	Uncharacterized protein. (135 aa)
	APZ42_034340	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1054 aa)
	APZ42_031733	Mothers against decapentaplegic homolog. (653 aa)
	APZ42_029135	Histone H2A; Belongs to the histone H2A family. (132 aa)
	APZ42_023386	Putative Daughterless protein. (68 aa)
	APZ42_021280	Putative Zinc finger E-box-binding homeobox 2. (837 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_011793	APZ42_029135	A0A162T115	A0A164PX54	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.664
APZ42_023092	APZ42_026322	A0A0P5XIS6	A0A0P5YKA8	Axin-1.	Putative Segment polarity protein dishevelled.	0.995
APZ42_023092	APZ42_031733	A0A0P5XIS6	A0A164MMD6	Axin-1.	Mothers against decapentaplegic homolog.	0.410
APZ42_023092	APZ42_034340	A0A0P5XIS6	A0A164K3P3	Axin-1.	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.415
APZ42_026322	APZ42_023092	A0A0P5YKA8	A0A0P5XIS6	Putative Segment polarity protein dishevelled.	Axin-1.	0.995
APZ42_026322	APZ42_034340	A0A0P5YKA8	A0A164K3P3	Putative Segment polarity protein dishevelled.	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.777
APZ42_029135	APZ42_011793	A0A164PX54	A0A162T115	Histone H2A; Belongs to the histone H2A family.	Uncharacterized protein.	0.664
APZ42_031733	APZ42_023092	A0A164MMD6	A0A0P5XIS6	Mothers against decapentaplegic homolog.	Axin-1.	0.410
APZ42_034340	APZ42_023092	A0A164K3P3	A0A0P5XIS6	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Axin-1.	0.415
APZ42_034340	APZ42_026322	A0A164K3P3	A0A0P5YKA8	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Putative Segment polarity protein dishevelled.	0.777