(14 nodes) Protein mannosylation network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_030756	Transmembrane protein 5. (401 aa)
	APZ42_029567	Transmembrane and TPR repeat-containing protein. (761 aa)
	APZ42_020366	Putative Transmembrane and TPR repeat-containing protein. (326 aa)
	APZ42_021215	Transmembrane and TPR repeat-containing protein. (704 aa)
	APZ42_023171	Putative Beta-1,4-glucuronyltransferase 1. (590 aa)
	APZ42_023704	Protein O-mannosyl-transferase 2. (710 aa)
	APZ42_023957	Glycosyltransferase protein LARGE1. (684 aa)
	EOG090X0B9X	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins. (240 aa)
	APZ42_014475	Protein O-mannosyl-transferase 1. (807 aa)
	APZ42_023710	Protein O-mannosyl-transferase 1. (730 aa)
	APZ42_002407	Transmembrane and TPR repeat-containing-like protein. (200 aa)
	APZ42_023715	Protein O-mannosyl-transferase 2. (737 aa)
	APZ42_020284	Dumpy-19 protein. (713 aa)
	APZ42_015198	Beta-1,4-glucuronyltransferase 1. (544 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_014475	APZ42_015198	A0A0P5HFP5	A0A162P9A4	Protein O-mannosyl-transferase 1.	Beta-1,4-glucuronyltransferase 1.	0.584
APZ42_014475	APZ42_023704	A0A0P5HFP5	A0A164UR08	Protein O-mannosyl-transferase 1.	Protein O-mannosyl-transferase 2.	0.872
APZ42_014475	APZ42_023710	A0A0P5HFP5	A0A0P5U0B2	Protein O-mannosyl-transferase 1.	Protein O-mannosyl-transferase 1.	0.873
APZ42_014475	APZ42_023715	A0A0P5HFP5	A0A162DGU6	Protein O-mannosyl-transferase 1.	Protein O-mannosyl-transferase 2.	0.870
APZ42_014475	APZ42_023957	A0A0P5HFP5	A0A164UCF2	Protein O-mannosyl-transferase 1.	Glycosyltransferase protein LARGE1.	0.522
APZ42_014475	APZ42_030756	A0A0P5HFP5	A0A164NB09	Protein O-mannosyl-transferase 1.	Transmembrane protein 5.	0.570
APZ42_014475	EOG090X0B9X	A0A0P5HFP5	A0A0P4XHM2	Protein O-mannosyl-transferase 1.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.626
APZ42_015198	APZ42_014475	A0A162P9A4	A0A0P5HFP5	Beta-1,4-glucuronyltransferase 1.	Protein O-mannosyl-transferase 1.	0.584
APZ42_015198	APZ42_023171	A0A162P9A4	A0A164V5W6	Beta-1,4-glucuronyltransferase 1.	Putative Beta-1,4-glucuronyltransferase 1.	0.905
APZ42_015198	APZ42_023957	A0A162P9A4	A0A164UCF2	Beta-1,4-glucuronyltransferase 1.	Glycosyltransferase protein LARGE1.	0.947
APZ42_015198	APZ42_030756	A0A162P9A4	A0A164NB09	Beta-1,4-glucuronyltransferase 1.	Transmembrane protein 5.	0.887
APZ42_015198	EOG090X0B9X	A0A162P9A4	A0A0P4XHM2	Beta-1,4-glucuronyltransferase 1.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.499
APZ42_020366	APZ42_021215	A0A164XJR1	A0A164WUZ2	Putative Transmembrane and TPR repeat-containing protein.	Transmembrane and TPR repeat-containing protein.	0.898
APZ42_021215	APZ42_020366	A0A164WUZ2	A0A164XJR1	Transmembrane and TPR repeat-containing protein.	Putative Transmembrane and TPR repeat-containing protein.	0.898
APZ42_023171	APZ42_015198	A0A164V5W6	A0A162P9A4	Putative Beta-1,4-glucuronyltransferase 1.	Beta-1,4-glucuronyltransferase 1.	0.905
APZ42_023171	APZ42_030756	A0A164V5W6	A0A164NB09	Putative Beta-1,4-glucuronyltransferase 1.	Transmembrane protein 5.	0.831
APZ42_023704	APZ42_014475	A0A164UR08	A0A0P5HFP5	Protein O-mannosyl-transferase 2.	Protein O-mannosyl-transferase 1.	0.872
APZ42_023704	EOG090X0B9X	A0A164UR08	A0A0P4XHM2	Protein O-mannosyl-transferase 2.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.432
APZ42_023710	APZ42_014475	A0A0P5U0B2	A0A0P5HFP5	Protein O-mannosyl-transferase 1.	Protein O-mannosyl-transferase 1.	0.873
APZ42_023710	EOG090X0B9X	A0A0P5U0B2	A0A0P4XHM2	Protein O-mannosyl-transferase 1.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.432