STRINGSTRING
APZ42_011434 APZ42_011434 APZ42_022748 APZ42_022748 APZ42_011553 APZ42_011553 APZ42_014664 APZ42_014664 APZ42_014606 APZ42_014606 APZ42_013561 APZ42_013561 APZ42_032694 APZ42_032694
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_011434SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (225 aa)
APZ42_022748SCA7 domain-containing protein. (657 aa)
APZ42_011553Polycomb group protein ASXL3. (1305 aa)
APZ42_014664Ubiquitin carboxyl-terminal hydrolase. (525 aa)
APZ42_014606STAGA complex 65 subunit gamma. (357 aa)
APZ42_013561TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein. (534 aa)
APZ42_032694Uncharacterized protein. (865 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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