STRINGSTRING
APZ42_031073 APZ42_031073 APZ42_031743 APZ42_031743 APZ42_032788 APZ42_032788 APZ42_032775 APZ42_032775 APZ42_033252 APZ42_033252 EOG090X09A7 EOG090X09A7 APZ42_033673 APZ42_033673 APZ42_034075 APZ42_034075 APZ42_034207 APZ42_034207 APZ42_034476 APZ42_034476 APZ42_016991 APZ42_016991 APZ42_000421 APZ42_000421 APZ42_001617 APZ42_001617 APZ42_003890 APZ42_003890 APZ42_004297 APZ42_004297 APZ42_005047 APZ42_005047 APZ42_005050 APZ42_005050 APZ42_005974 APZ42_005974 APZ42_008209 APZ42_008209 APZ42_011797 APZ42_011797 LSM1 LSM1 APZ42_011711 APZ42_011711 APZ42_011545 APZ42_011545 APZ42_011331 APZ42_011331 APZ42_011344 APZ42_011344 APZ42_011192 APZ42_011192 APZ42_012307 APZ42_012307 APZ42_012837 APZ42_012837 APZ42_013180 APZ42_013180 APZ42_013549 APZ42_013549 APZ42_013906 APZ42_013906 APZ42_014294 APZ42_014294 APZ42_014179 APZ42_014179 APZ42_014604 APZ42_014604 APZ42_014948 APZ42_014948 APZ42_024429 APZ42_024429 APZ42_024544 APZ42_024544 APZ42_019608 APZ42_019608 APZ42_018108 APZ42_018108 APZ42_021341 APZ42_021341 APZ42_029561 APZ42_029561 APZ42_028638 APZ42_028638 APZ42_017061 APZ42_017061 APZ42_018670 APZ42_018670 APZ42_013175 APZ42_013175 LSM4 LSM4 APZ42_016910 APZ42_016910 APZ42_017571 APZ42_017571 APZ42_032635 APZ42_032635 APZ42_012392 APZ42_012392 APZ42_013675 APZ42_013675 APZ42_011505 APZ42_011505 APZ42_012800 APZ42_012800 APZ42_023758 APZ42_023758 APZ42_012906 APZ42_012906 APZ42_024057 APZ42_024057 APZ42_023527 APZ42_023527 EOG090X07B6 EOG090X07B6 PAN3 PAN3 APZ42_034049 APZ42_034049 APZ42_024483 APZ42_024483 APZ42_025064 APZ42_025064 APZ42_020662 APZ42_020662 APZ42_027415 APZ42_027415 APZ42_026705 APZ42_026705 APZ42_020742 APZ42_020742 EOG090X0A4V EOG090X0A4V APZ42_031015 APZ42_031015 APZ42_016309 APZ42_016309 APZ42_017342 APZ42_017342 APZ42_017132 APZ42_017132 APZ42_017785 APZ42_017785 APZ42_017820 APZ42_017820 APZ42_018008 APZ42_018008 APZ42_018583 APZ42_018583 APZ42_019324 APZ42_019324 APZ42_019730 APZ42_019730 APZ42_020706 APZ42_020706 APZ42_020913 APZ42_020913 APZ42_021344 APZ42_021344 APZ42_021442 APZ42_021442 APZ42_022865 APZ42_022865 APZ42_022066 APZ42_022066 APZ42_024147 APZ42_024147 APZ42_024163 APZ42_024163 APZ42_024108 APZ42_024108 APZ42_024056 APZ42_024056 APZ42_023830 APZ42_023830 APZ42_023773 APZ42_023773 APZ42_024658 APZ42_024658 APZ42_024747 APZ42_024747 APZ42_025428 APZ42_025428 APZ42_025991 APZ42_025991 APZ42_026487 APZ42_026487 APZ42_026553 APZ42_026553 APZ42_026680 APZ42_026680 APZ42_027020 APZ42_027020 APZ42_027184 APZ42_027184 APZ42_027186 APZ42_027186 APZ42_028384 APZ42_028384 APZ42_028743 APZ42_028743 APZ42_028598 APZ42_028598 APZ42_029323 APZ42_029323
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_031073Putative Double-stranded RNA-binding protein Staufen. (542 aa)
APZ42_031743Putative Synphilin-1/sw. (709 aa)
APZ42_032788Putative FAST kinase domain-containing protein. (574 aa)
APZ42_032775Methylosome protein 50. (335 aa)
APZ42_033252Putative Cytoplasmic polyadenylation element-binding protein 1. (622 aa)
EOG090X09A7Cell differentiation protein RCD1. (299 aa)
APZ42_033673Autophagy-related 8a. (237 aa)
APZ42_034075Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family. (779 aa)
APZ42_034207Integrase_H2C2 domain-containing protein. (186 aa)
APZ42_034476Putative Dis3; Belongs to the RNR ribonuclease family. (1310 aa)
APZ42_016991Uncharacterized protein. (1406 aa)
APZ42_000421Putative ATP-dependent RNA Helicase me31b. (74 aa)
APZ42_001617Purity of essence protein. (235 aa)
APZ42_003890ATP-dependent RNA Helicase me31b. (92 aa)
APZ42_004297Xaa-Pro dipeptidase. (105 aa)
APZ42_005047ATP-dependent RNA Helicase me31b. (121 aa)
APZ42_005050Putative ATP-dependent RNA Helicase me31b. (158 aa)
APZ42_005974Xaa-Pro dipeptidase. (82 aa)
APZ42_008209Purity of essence protein. (228 aa)
APZ42_011797Putative DAZ-associated protein 1. (461 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (137 aa)
APZ42_011711Purity of essence protein. (4218 aa)
APZ42_011545Protein transport Sec16A-like protein. (2112 aa)
APZ42_011331LA-related protein 1. (1144 aa)
APZ42_011344Putative RING finger and CCCH-type Zinc finger domain-containing protein 2. (875 aa)
APZ42_011192Putative Xaa-Pro dipeptidase. (367 aa)
APZ42_012307Putative Cold-shock DNA-binding family protein. (321 aa)
APZ42_012837Protein argonaute-1. (925 aa)
APZ42_013180Putative Helicase MOV-10. (1100 aa)
APZ42_013549Small nuclear ribonucleoprotein G. (77 aa)
APZ42_013906PAB-dependent poly(A)-specific ribonuclease subunit PAN2. (1060 aa)
APZ42_014294Putative LIM domain-containing protein 1. (499 aa)
APZ42_014179Putative RNA-binding protein MEX3D. (492 aa)
APZ42_014604RRM domain-containing protein. (611 aa)
APZ42_014948Putative Pumilio. (1214 aa)
APZ42_024429Putative Helicase with Zinc finger domain. (210 aa)
APZ42_024544Putative CCR4-NOT transcription complex subunit. (733 aa)
APZ42_019608Eukaryotic translation initiation factor 4E transporter. (882 aa)
APZ42_018108Aubergine/Piwi copy E-like protein. (591 aa)
APZ42_021341Putative Nucleolysin TIAR. (82 aa)
APZ42_029561Small ubiquitin-related modifier 1. (129 aa)
APZ42_028638U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
APZ42_017061DNA-directed RNA polymerase II subunit RPB7. (172 aa)
APZ42_018670Karyopherin importin beta. (885 aa)
APZ42_013175Enhancer of mRNA-decapping protein 4. (1123 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (134 aa)
APZ42_016910RRM domain-containing protein. (1633 aa)
APZ42_017571Uncharacterized protein. (777 aa)
APZ42_032635Putative Tudor domain-containing protein 1. (1531 aa)
APZ42_012392Putative FAST kinase domain-containing protein 1. (946 aa)
APZ42_013675Putative UPF0692 protein. (279 aa)
APZ42_011505Regulator of nonsense transcripts 1. (1129 aa)
APZ42_012800Polymerase delta-interacting protein. (388 aa)
APZ42_023758CCR4-NOT transcription complex subunit. (459 aa)
APZ42_012906ATP-dependent RNA Helicase me31b; Belongs to the DEAD box helicase family. (450 aa)
APZ42_024057Tudor domain-containing protein. (2003 aa)
APZ42_023527Uncharacterized protein. (460 aa)
EOG090X07B6mRNA-decapping enzyme 1B. (405 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (674 aa)
APZ42_034049Putative ATP-dependent RNA helicase YTHDC2. (1413 aa)
APZ42_024483RNA pseudouridylate synthase domain-containing protein 4. (527 aa)
APZ42_025064CCR4-NOT transcription complex subunit. (2481 aa)
APZ42_020662Uncharacterized protein. (467 aa)
APZ42_027415Protein argonaute-1; Belongs to the argonaute family. (945 aa)
APZ42_026705Heterogeneous nuclear ribonucleoprotein Q. (684 aa)
APZ42_020742Uncharacterized protein. (1016 aa)
EOG090X0A4VCleavage stimulation factor subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (340 aa)
APZ42_031015Sex-lethal protein variant 2. (297 aa)
APZ42_016309Protein CASC3-like protein. (936 aa)
APZ42_017342tRNA pseudouridine synthase 2. (308 aa)
APZ42_017132Uncharacterized protein. (1399 aa)
APZ42_017785Helicase with Zinc finger domain. (691 aa)
APZ42_017820U6 snRNA-associated Sm protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
APZ42_018008Putative DNA polymerase iota. (528 aa)
APZ42_018583Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. (352 aa)
APZ42_019324Putative NF-kappa-B inhibitor zeta. (908 aa)
APZ42_019730La-related 4B-like protein. (1025 aa)
APZ42_020706Putative ATP-dependent RNA helicase YTHDC2. (1270 aa)
APZ42_020913Ras GTPase-activating protein-binding protein. (578 aa)
APZ42_021344Uncharacterized protein. (1082 aa)
APZ42_021442ATP-dependent RNA helicase DDX19B. (490 aa)
APZ42_022865Putative Bruno-3. (377 aa)
APZ42_022066Putative Importin subunit beta-1. (588 aa)
APZ42_024147Uncharacterized protein. (1777 aa)
APZ42_024163RNA binding protein fox-1 2. (229 aa)
APZ42_024108Putative Maternal protein tudor. (2582 aa)
APZ42_0240565'-3' exoribonuclease 1. (1639 aa)
APZ42_023830Putative Zinc finger CCCH domain-containing protein 12C. (923 aa)
APZ42_023773AN1-type Zinc finger protein 1. (249 aa)
APZ42_024658mRNA-decapping enzyme 2. (365 aa)
APZ42_024747Fragile X mental retardation Syndrome-related protein. (637 aa)
APZ42_025428SAM_Exu domain-containing protein. (519 aa)
APZ42_025991PAT1 1 protein. (724 aa)
APZ42_026487Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (621 aa)
APZ42_026553RNA pseudouridylate synthase domain-containing protein 4. (359 aa)
APZ42_026680ATP-dependent RNA Helicase me31b; Belongs to the DEAD box helicase family. (303 aa)
APZ42_027020Cold shock domain-containing protein. (156 aa)
APZ42_027184Protein LSM14 B. (573 aa)
APZ42_027186Tudor domain-containing protein 7. (1104 aa)
APZ42_028384Importin subunit beta. (888 aa)
APZ42_028743Prolyl 3-hydroxylase OGFOD1. (527 aa)
APZ42_028598Phospholipase D family member protein. (212 aa)
APZ42_029323Putative F58A4.6 protein. (184 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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