(8 nodes) Male germ-line stem cell population maintenance network (Daphnia magna)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_022381	No child left behind. (493 aa)
	APZ42_022227	Nuclear pore complex protein Nup98-Nup96. (1843 aa)
	EOG090X07WF	DnaJ subfamily B member 11. (356 aa)
	APZ42_013766	Putative Nuclear pore complex protein Nup98-Nup96. (224 aa)
	APZ42_011793	Uncharacterized protein. (2828 aa)
	APZ42_029135	Histone H2A; Belongs to the histone H2A family. (132 aa)
	APZ42_028777	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (360 aa)
	APZ42_016293	Lysine-specific demethylase lid. (1579 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_011793	APZ42_013766	A0A162T115	A0A162QIP0	Uncharacterized protein.	Putative Nuclear pore complex protein Nup98-Nup96.	0.545
APZ42_011793	APZ42_022227	A0A162T115	A0A0P5EGA2	Uncharacterized protein.	Nuclear pore complex protein Nup98-Nup96.	0.545
APZ42_011793	APZ42_029135	A0A162T115	A0A164PX54	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.664
APZ42_013766	APZ42_011793	A0A162QIP0	A0A162T115	Putative Nuclear pore complex protein Nup98-Nup96.	Uncharacterized protein.	0.545
APZ42_013766	APZ42_016293	A0A162QIP0	A0A165ACJ9	Putative Nuclear pore complex protein Nup98-Nup96.	Lysine-specific demethylase lid.	0.506
APZ42_016293	APZ42_013766	A0A165ACJ9	A0A162QIP0	Lysine-specific demethylase lid.	Putative Nuclear pore complex protein Nup98-Nup96.	0.506
APZ42_016293	APZ42_022227	A0A165ACJ9	A0A0P5EGA2	Lysine-specific demethylase lid.	Nuclear pore complex protein Nup98-Nup96.	0.506
APZ42_016293	APZ42_029135	A0A165ACJ9	A0A164PX54	Lysine-specific demethylase lid.	Histone H2A; Belongs to the histone H2A family.	0.744
APZ42_022227	APZ42_011793	A0A0P5EGA2	A0A162T115	Nuclear pore complex protein Nup98-Nup96.	Uncharacterized protein.	0.545
APZ42_022227	APZ42_016293	A0A0P5EGA2	A0A165ACJ9	Nuclear pore complex protein Nup98-Nup96.	Lysine-specific demethylase lid.	0.506
APZ42_029135	APZ42_011793	A0A164PX54	A0A162T115	Histone H2A; Belongs to the histone H2A family.	Uncharacterized protein.	0.664
APZ42_029135	APZ42_016293	A0A164PX54	A0A165ACJ9	Histone H2A; Belongs to the histone H2A family.	Lysine-specific demethylase lid.	0.744