(14 nodes) RNA capping network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_014833	Nucleolar protein 9. (609 aa)
	APZ42_023597	Putative mRNA CAP guanine-N7 methyltransferase. (121 aa)
	EOG090X07I2	mRNA cap guanine-N7 methyltransferase. (431 aa)
	APZ42_030689	Putative Activator of basal transcription 1. (228 aa)
	APZ42_033017	Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 1. (860 aa)
	APZ42_005193	mRNA_cap_C domain-containing protein. (192 aa)
	APZ42_020715	Nuclear cap-binding subunit 3-like protein. (488 aa)
	APZ42_012990	Putative Prip interacting protein, pimt. (504 aa)
	APZ42_034378	Transducin beta protein 3. (800 aa)
	APZ42_011579	Nuclear cap-binding protein subunit 1. (809 aa)
	APZ42_006478	mRNA_cap_C domain-containing protein. (194 aa)
	APZ42_018144	Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (608 aa)
	APZ42_013465	mRNA_cap_enzyme domain-containing protein. (349 aa)
	APZ42_013756	Putative Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 2. (576 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_005193	APZ42_011579	A0A164GLA5	A0A0P5IV70	mRNA_cap_C domain-containing protein.	Nuclear cap-binding protein subunit 1.	0.663
APZ42_005193	APZ42_023597	A0A164GLA5	A0A164UU70	mRNA_cap_C domain-containing protein.	Putative mRNA CAP guanine-N7 methyltransferase.	0.640
APZ42_005193	EOG090X07I2	A0A164GLA5	A0A164URF9	mRNA_cap_C domain-containing protein.	mRNA cap guanine-N7 methyltransferase.	0.780
APZ42_006478	APZ42_011579	A0A164FVT1	A0A0P5IV70	mRNA_cap_C domain-containing protein.	Nuclear cap-binding protein subunit 1.	0.663
APZ42_006478	APZ42_023597	A0A164FVT1	A0A164UU70	mRNA_cap_C domain-containing protein.	Putative mRNA CAP guanine-N7 methyltransferase.	0.640
APZ42_006478	EOG090X07I2	A0A164FVT1	A0A164URF9	mRNA_cap_C domain-containing protein.	mRNA cap guanine-N7 methyltransferase.	0.780
APZ42_011579	APZ42_005193	A0A0P5IV70	A0A164GLA5	Nuclear cap-binding protein subunit 1.	mRNA_cap_C domain-containing protein.	0.663
APZ42_011579	APZ42_006478	A0A0P5IV70	A0A164FVT1	Nuclear cap-binding protein subunit 1.	mRNA_cap_C domain-containing protein.	0.663
APZ42_011579	APZ42_013465	A0A0P5IV70	A0A162QV48	Nuclear cap-binding protein subunit 1.	mRNA_cap_enzyme domain-containing protein.	0.663
APZ42_011579	APZ42_018144	A0A0P5IV70	A0A0P4ZTT3	Nuclear cap-binding protein subunit 1.	Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.	0.663
APZ42_011579	APZ42_020715	A0A0P5IV70	A0A0P5YQ54	Nuclear cap-binding protein subunit 1.	Nuclear cap-binding subunit 3-like protein.	0.807
APZ42_011579	APZ42_023597	A0A0P5IV70	A0A164UU70	Nuclear cap-binding protein subunit 1.	Putative mRNA CAP guanine-N7 methyltransferase.	0.711
APZ42_011579	EOG090X07I2	A0A0P5IV70	A0A164URF9	Nuclear cap-binding protein subunit 1.	mRNA cap guanine-N7 methyltransferase.	0.737
APZ42_013465	APZ42_011579	A0A162QV48	A0A0P5IV70	mRNA_cap_enzyme domain-containing protein.	Nuclear cap-binding protein subunit 1.	0.663
APZ42_013465	APZ42_023597	A0A162QV48	A0A164UU70	mRNA_cap_enzyme domain-containing protein.	Putative mRNA CAP guanine-N7 methyltransferase.	0.640
APZ42_013465	EOG090X07I2	A0A162QV48	A0A164URF9	mRNA_cap_enzyme domain-containing protein.	mRNA cap guanine-N7 methyltransferase.	0.780
APZ42_013756	APZ42_023597	A0A162QI50	A0A164UU70	Putative Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 2.	Putative mRNA CAP guanine-N7 methyltransferase.	0.414
APZ42_013756	EOG090X07I2	A0A162QI50	A0A164URF9	Putative Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 2.	mRNA cap guanine-N7 methyltransferase.	0.570
APZ42_014833	APZ42_034378	A0A162NY84	A0A162CAN5	Nucleolar protein 9.	Transducin beta protein 3.	0.795
APZ42_018144	APZ42_011579	A0A0P4ZTT3	A0A0P5IV70	Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.	Nuclear cap-binding protein subunit 1.	0.663