(8 nodes) mRNA transcription by RNA polymerase II network (Daphnia magna)

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second shell of interactors

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Predicted Interactions

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protein homology

Your Input:
	APZ42_034382	Transcription initiation factor IIB. (319 aa)
	APZ42_017207	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (280 aa)
	APZ42_010999	General transcription factor IIE subunit 1. (422 aa)
	APZ42_032789	Transcription initiation factor iib general transcription factor tfiib. (308 aa)
	APZ42_015656	Putative Transcription initiation factor TFIID subunit 3. (928 aa)
	APZ42_012562	Uncharacterized protein. (287 aa)
	APZ42_012032	Putative Transcription elongation factor SPT6. (2295 aa)
	APZ42_011202	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (280 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_010999	APZ42_011202	A0A0P5LGD3	A0A162SGS6	General transcription factor IIE subunit 1.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.988
APZ42_010999	APZ42_015656	A0A0P5LGD3	A0A162NTQ4	General transcription factor IIE subunit 1.	Putative Transcription initiation factor TFIID subunit 3.	0.868
APZ42_010999	APZ42_017207	A0A0P5LGD3	A0A0P4ZEP6	General transcription factor IIE subunit 1.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.988
APZ42_010999	APZ42_032789	A0A0P5LGD3	A0A0P5XYS4	General transcription factor IIE subunit 1.	Transcription initiation factor iib general transcription factor tfiib.	0.983
APZ42_010999	APZ42_034382	A0A0P5LGD3	A0A164K5J2	General transcription factor IIE subunit 1.	Transcription initiation factor IIB.	0.983
APZ42_011202	APZ42_010999	A0A162SGS6	A0A0P5LGD3	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	General transcription factor IIE subunit 1.	0.988
APZ42_011202	APZ42_015656	A0A162SGS6	A0A162NTQ4	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Putative Transcription initiation factor TFIID subunit 3.	0.857
APZ42_011202	APZ42_032789	A0A162SGS6	A0A0P5XYS4	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor iib general transcription factor tfiib.	0.955
APZ42_011202	APZ42_034382	A0A162SGS6	A0A164K5J2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor IIB.	0.955
APZ42_015656	APZ42_010999	A0A162NTQ4	A0A0P5LGD3	Putative Transcription initiation factor TFIID subunit 3.	General transcription factor IIE subunit 1.	0.868
APZ42_015656	APZ42_011202	A0A162NTQ4	A0A162SGS6	Putative Transcription initiation factor TFIID subunit 3.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.857
APZ42_015656	APZ42_017207	A0A162NTQ4	A0A0P4ZEP6	Putative Transcription initiation factor TFIID subunit 3.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.857
APZ42_015656	APZ42_032789	A0A162NTQ4	A0A0P5XYS4	Putative Transcription initiation factor TFIID subunit 3.	Transcription initiation factor iib general transcription factor tfiib.	0.891
APZ42_015656	APZ42_034382	A0A162NTQ4	A0A164K5J2	Putative Transcription initiation factor TFIID subunit 3.	Transcription initiation factor IIB.	0.891
APZ42_017207	APZ42_010999	A0A0P4ZEP6	A0A0P5LGD3	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	General transcription factor IIE subunit 1.	0.988
APZ42_017207	APZ42_015656	A0A0P4ZEP6	A0A162NTQ4	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Putative Transcription initiation factor TFIID subunit 3.	0.857
APZ42_017207	APZ42_032789	A0A0P4ZEP6	A0A0P5XYS4	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor iib general transcription factor tfiib.	0.955
APZ42_017207	APZ42_034382	A0A0P4ZEP6	A0A164K5J2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor IIB.	0.955
APZ42_032789	APZ42_010999	A0A0P5XYS4	A0A0P5LGD3	Transcription initiation factor iib general transcription factor tfiib.	General transcription factor IIE subunit 1.	0.983
APZ42_032789	APZ42_011202	A0A0P5XYS4	A0A162SGS6	Transcription initiation factor iib general transcription factor tfiib.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.955