STRINGSTRING
APZ42_018104 APZ42_018104 APZ42_031077 APZ42_031077 APZ42_013766 APZ42_013766 APZ42_011136 APZ42_011136 APZ42_022227 APZ42_022227 APZ42_034337 APZ42_034337 APZ42_021847 APZ42_021847
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_018104Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (305 aa)
APZ42_031077Nuclear pore complex Nup153-like protein. (1496 aa)
APZ42_013766Putative Nuclear pore complex protein Nup98-Nup96. (224 aa)
APZ42_011136NTF2-related export protein 1. (137 aa)
APZ42_022227Nuclear pore complex protein Nup98-Nup96. (1843 aa)
APZ42_034337Putative Nuclear pore glycoprotein p62. (787 aa)
APZ42_021847Nuclear pore complex protein Nup54. (580 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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