(18 nodes) Double-strand break repair via synthesis-dependent strand annealing network (Daphnia magna)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

gene neighborhood

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Your Input:
	APZ42_026490	ATM/Rad3 and Mei-41-like protein; Belongs to the PI3/PI4-kinase family. (2568 aa)
	APZ42_031336	Putative RAD54B meiotic recombination protein. (445 aa)
	APZ42_031137	Bloom Syndrome-like protein. (639 aa)
	APZ42_030443	Putative Nibrin. (610 aa)
	APZ42_029888	Putative RAD54B meiotic recombination protein. (267 aa)
	APZ42_024622	Putative RAD54B meiotic recombination protein. (135 aa)
	APZ42_034246	Putative DNA helicase bloom's syndrome protein A. (1291 aa)
	APZ42_031912	Putative ATP-dependent RNA helicase DHX58. (1907 aa)
	APZ42_034214	RAD54B meiotic recombination protein. (266 aa)
	APZ42_024112	DNA repair and recombination protein RAD54B. (1018 aa)
	EOG090X0906	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (341 aa)
	APZ42_022013	DNA repair protein RAD52. (385 aa)
	APZ42_017973	Meiotic recombination protein DMC1/LIM15. (358 aa)
	APZ42_030960	RAD54, DNA repair and recombination protein. (780 aa)
	APZ42_016949	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A protein 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (688 aa)
	APZ42_030528	Meiotic recombination protein SPO11. (363 aa)
	APZ42_006332	Putative DNA helicase bloom's syndrome protein A. (251 aa)
	APZ42_012937	Putative RAD54B meiotic recombination protein. (256 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_006332	APZ42_012937	A0A162BW86	A0A162RBR1	Putative DNA helicase bloom's syndrome protein A.	Putative RAD54B meiotic recombination protein.	0.514
APZ42_006332	APZ42_017973	A0A162BW86	A0A0P5GQW6	Putative DNA helicase bloom's syndrome protein A.	Meiotic recombination protein DMC1/LIM15.	0.865
APZ42_006332	APZ42_022013	A0A162BW86	A0A0P4Y4Y5	Putative DNA helicase bloom's syndrome protein A.	DNA repair protein RAD52.	0.888
APZ42_006332	APZ42_024112	A0A162BW86	A0A164UG66	Putative DNA helicase bloom's syndrome protein A.	DNA repair and recombination protein RAD54B.	0.514
APZ42_006332	APZ42_024622	A0A162BW86	A0A164TW58	Putative DNA helicase bloom's syndrome protein A.	Putative RAD54B meiotic recombination protein.	0.514
APZ42_006332	APZ42_026490	A0A162BW86	A0A162EDE1	Putative DNA helicase bloom's syndrome protein A.	ATM/Rad3 and Mei-41-like protein; Belongs to the PI3/PI4-kinase family.	0.906
APZ42_006332	APZ42_029888	A0A162BW86	A0A164P8B3	Putative DNA helicase bloom's syndrome protein A.	Putative RAD54B meiotic recombination protein.	0.514
APZ42_006332	APZ42_030443	A0A162BW86	A0A164NRX7	Putative DNA helicase bloom's syndrome protein A.	Putative Nibrin.	0.728
APZ42_006332	APZ42_030960	A0A162BW86	A0A0P6AH32	Putative DNA helicase bloom's syndrome protein A.	RAD54, DNA repair and recombination protein.	0.565
APZ42_006332	APZ42_031137	A0A162BW86	A0A164N3N2	Putative DNA helicase bloom's syndrome protein A.	Bloom Syndrome-like protein.	0.910
APZ42_006332	APZ42_031336	A0A162BW86	A0A164MXN9	Putative DNA helicase bloom's syndrome protein A.	Putative RAD54B meiotic recombination protein.	0.514
APZ42_006332	APZ42_031912	A0A162BW86	A0A164ME63	Putative DNA helicase bloom's syndrome protein A.	Putative ATP-dependent RNA helicase DHX58.	0.999
APZ42_006332	APZ42_034214	A0A162BW86	A0A164KC32	Putative DNA helicase bloom's syndrome protein A.	RAD54B meiotic recombination protein.	0.514
APZ42_006332	EOG090X0906	A0A162BW86	A0A0N8A230	Putative DNA helicase bloom's syndrome protein A.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.953
APZ42_012937	APZ42_006332	A0A162RBR1	A0A162BW86	Putative RAD54B meiotic recombination protein.	Putative DNA helicase bloom's syndrome protein A.	0.514
APZ42_012937	APZ42_016949	A0A162RBR1	A0A0P6BSY9	Putative RAD54B meiotic recombination protein.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A protein 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.	0.406
APZ42_012937	APZ42_017973	A0A162RBR1	A0A0P5GQW6	Putative RAD54B meiotic recombination protein.	Meiotic recombination protein DMC1/LIM15.	0.646
APZ42_012937	APZ42_022013	A0A162RBR1	A0A0P4Y4Y5	Putative RAD54B meiotic recombination protein.	DNA repair protein RAD52.	0.556
APZ42_012937	APZ42_030960	A0A162RBR1	A0A0P6AH32	Putative RAD54B meiotic recombination protein.	RAD54, DNA repair and recombination protein.	0.634
APZ42_012937	APZ42_031137	A0A162RBR1	A0A164N3N2	Putative RAD54B meiotic recombination protein.	Bloom Syndrome-like protein.	0.514