STRINGSTRING
APZ42_012615 APZ42_012615 APZ42_016204 APZ42_016204 APZ42_019106 APZ42_019106 EOG090X0ESN EOG090X0ESN APZ42_031732 APZ42_031732 APZ42_004669 APZ42_004669 APZ42_013388 APZ42_013388 APZ42_014300 APZ42_014300 APZ42_013394 APZ42_013394
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_012615Rho-related GTP-binding protein RhoF. (223 aa)
APZ42_016204Uncharacterized protein. (913 aa)
APZ42_019106Putative Basement membrane-specific heparan sulfate proteoglycan core protein. (575 aa)
EOG090X0ESNProtein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (200 aa)
APZ42_031732Tyrosine-protein kinase. (733 aa)
APZ42_004669Ras GTP-binding protein Rho1. (41 aa)
APZ42_013388Putative Basement membrane-specific heparan sulfate proteoglycan core protein. (1513 aa)
APZ42_014300Vacuolar protein-sorting-associated protein 25. (172 aa)
APZ42_013394Exocyst complex component 8. (753 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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