(50 nodes) Locomotor rhythm network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_021631	Protein unc-80. (3691 aa)
	APZ42_024546	Uncharacterized protein. (927 aa)
	APZ42_029764	F-box/WD repeat-containing protein 1A. (510 aa)
	APZ42_029204	Lethal (2). (411 aa)
	APZ42_020981	Disks large 1 tumor suppressor protein; Belongs to the MAGUK family. (912 aa)
	APZ42_026933	LIM domain only protein 3. (311 aa)
	APZ42_032639	Pantothenate kinase 2, mitochondrial. (404 aa)
	APZ42_034335	Protein TIMELESS. (1183 aa)
	APZ42_016484	Cullin-3; Belongs to the cullin family. (771 aa)
	APZ42_024863	Uncharacterized protein. (468 aa)
	APZ42_033012	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit. (1046 aa)
	APZ42_011771	WD_REPEATS_REGION domain-containing protein. (493 aa)
	EOG090X08JU	Nuclear factor interleukin-3-regulated protein. (797 aa)
	APZ42_024061	Timeless. (972 aa)
	APZ42_029467	SERTA motif domain-containing protein. (635 aa)
	APZ42_016628	Sodium leak channel non-selective protein. (1789 aa)
	APZ42_027214	LIM domain only protein 3. (209 aa)
	APZ42_013410	Class b secretin g-protein coupled receptor gprcal2; Belongs to the G-protein coupled receptor 2 family. (521 aa)
	APZ42_022790	Uncharacterized protein. (1061 aa)
	APZ42_020558	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. (416 aa)
	APZ42_032885	F-box domain-containing protein. (183 aa)
	APZ42_026099	Protein unc-79. (2515 aa)
	APZ42_015653	Neuronal PAS domain-containing protein. (908 aa)
	APZ42_014114	Double-stranded RNA-specific editase B2. (790 aa)
	APZ42_011694	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (545 aa)
	APZ42_009608	Mycosubtilin synthase subunit C. (103 aa)
	APZ42_033598	Aryl hydrocarbon receptor nuclear translocator protein 1. (946 aa)
	APZ42_032079	F-box domain-containing protein. (447 aa)
	APZ42_031923	Alpha-N-acetylglucosaminidase. (797 aa)
	APZ42_031915	Alpha-N-acetylglucosaminidase. (731 aa)
	APZ42_029781	F-box domain-containing protein. (442 aa)
	APZ42_028791	Uncharacterized protein. (918 aa)
	APZ42_028358	Mycosubtilin synthase subunit C. (899 aa)
	APZ42_028354	Mycosubtilin synthase subunit C. (923 aa)
	APZ42_028350	Mycosubtilin synthase subunit C. (884 aa)
	APZ42_027310	Glucose-repressible alcohol dehydrogenase. (365 aa)
	APZ42_016508	Uncharacterized protein. (426 aa)
	APZ42_016293	Lysine-specific demethylase lid. (1579 aa)
	APZ42_016910	RRM domain-containing protein. (1633 aa)
	APZ42_016654	Casein kinase I; Belongs to the protein kinase superfamily. (409 aa)
	APZ42_017997	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4. (662 aa)
	APZ42_018131	Non-specific serine/threonine protein kinase. (649 aa)
	APZ42_018678	Putative Myocyte-specific enhancer factor 2A. (384 aa)
	APZ42_019849	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (365 aa)
	APZ42_027338	Putative CREB-binding protein. (2063 aa)
	APZ42_024747	Fragile X mental retardation Syndrome-related protein. (637 aa)
	EOG090X01OH	Protein O-GlcNAcase. (886 aa)
	APZ42_021855	Photoreceptor-specific nuclear receptor. (734 aa)
	APZ42_020790	Neurofibromin. (2212 aa)
	APZ42_020568	Tyrosine-protein kinase. (587 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_009608	APZ42_028354	A0A164DX04	A0A164QRE7	Mycosubtilin synthase subunit C.	Mycosubtilin synthase subunit C.	0.449
APZ42_009608	APZ42_028358	A0A164DX04	A0A164QRC0	Mycosubtilin synthase subunit C.	Mycosubtilin synthase subunit C.	0.445
APZ42_011771	APZ42_015653	A0A0P5UNX2	A0A162NSW5	WD_REPEATS_REGION domain-containing protein.	Neuronal PAS domain-containing protein.	0.448
APZ42_011771	APZ42_016484	A0A0P5UNX2	A0A0P5QRU8	WD_REPEATS_REGION domain-containing protein.	Cullin-3; Belongs to the cullin family.	0.827
APZ42_011771	APZ42_016654	A0A0P5UNX2	A0A165A2Z8	WD_REPEATS_REGION domain-containing protein.	Casein kinase I; Belongs to the protein kinase superfamily.	0.669
APZ42_011771	APZ42_033598	A0A0P5UNX2	A0A164KXJ8	WD_REPEATS_REGION domain-containing protein.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.520
APZ42_014114	APZ42_024747	A0A162PZT8	A0A164TTC6	Double-stranded RNA-specific editase B2.	Fragile X mental retardation Syndrome-related protein.	0.513
APZ42_015653	APZ42_011771	A0A162NSW5	A0A0P5UNX2	Neuronal PAS domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.448
APZ42_015653	APZ42_016508	A0A162NSW5	A0A165AGE6	Neuronal PAS domain-containing protein.	Uncharacterized protein.	0.448
APZ42_015653	APZ42_016654	A0A162NSW5	A0A165A2Z8	Neuronal PAS domain-containing protein.	Casein kinase I; Belongs to the protein kinase superfamily.	0.885
APZ42_015653	APZ42_020558	A0A162NSW5	A0A162CBY6	Neuronal PAS domain-containing protein.	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.518
APZ42_015653	APZ42_020568	A0A162NSW5	A0A164X7E9	Neuronal PAS domain-containing protein.	Tyrosine-protein kinase.	0.518
APZ42_015653	APZ42_021855	A0A162NSW5	A0A164WB98	Neuronal PAS domain-containing protein.	Photoreceptor-specific nuclear receptor.	0.613
APZ42_015653	APZ42_022790	A0A162NSW5	A0A162C899	Neuronal PAS domain-containing protein.	Uncharacterized protein.	0.677
APZ42_015653	APZ42_024061	A0A162NSW5	A0A0P5WJ34	Neuronal PAS domain-containing protein.	Timeless.	0.833
APZ42_015653	APZ42_024863	A0A162NSW5	A0A0P5TLI2	Neuronal PAS domain-containing protein.	Uncharacterized protein.	0.448
APZ42_015653	APZ42_027338	A0A162NSW5	A0A164RHI9	Neuronal PAS domain-containing protein.	Putative CREB-binding protein.	0.677
APZ42_015653	APZ42_029764	A0A162NSW5	A0A0P4WPW7	Neuronal PAS domain-containing protein.	F-box/WD repeat-containing protein 1A.	0.448
APZ42_015653	APZ42_029781	A0A162NSW5	A0A164PBE7	Neuronal PAS domain-containing protein.	F-box domain-containing protein.	0.448
APZ42_015653	APZ42_032079	A0A162NSW5	A0A164MAD1	Neuronal PAS domain-containing protein.	F-box domain-containing protein.	0.448