STRINGSTRING
APZ42_017610 APZ42_017610 APZ42_030968 APZ42_030968 APZ42_023094 APZ42_023094 APZ42_019015 APZ42_019015 APZ42_026328 APZ42_026328 APZ42_015345 APZ42_015345 APZ42_011884 APZ42_011884 APZ42_008239 APZ42_008239 APZ42_028777 APZ42_028777 APZ42_018583 APZ42_018583
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_017610Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (519 aa)
APZ42_030968Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (301 aa)
APZ42_023094Putative Division abnormally delayed protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (487 aa)
APZ42_019015U3 small nucleolar RNA-associated protein 18. (598 aa)
APZ42_026328Loquacious. (360 aa)
APZ42_015345Charged multivesicular body protein 4B. (140 aa)
APZ42_011884ALG-2 interacting protein X. (813 aa)
APZ42_008239Programmed cell death 6-interacting protein. (363 aa)
APZ42_028777Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (360 aa)
APZ42_018583Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. (352 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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