STRINGSTRING
APZ42_010892 APZ42_010892 APZ42_033094 APZ42_033094 APZ42_032688 APZ42_032688 APZ42_030382 APZ42_030382 APZ42_020515 APZ42_020515 APZ42_024354 APZ42_024354 APZ42_010846 APZ42_010846 APZ42_016448 APZ42_016448 APZ42_031339 APZ42_031339 APZ42_019570 APZ42_019570 APZ42_013595 APZ42_013595
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_010892Putative Spectrin beta chain. (77 aa)
APZ42_033094Spectrin beta chain-like protein. (465 aa)
APZ42_032688Teneurin-3. (3344 aa)
APZ42_030382Rho GTPase-activating protein 28. (1734 aa)
APZ42_020515Synaptojanin-1. (494 aa)
APZ42_024354Putative ELKS/RAB6-interacting/CAST family member. (667 aa)
APZ42_010846Spectrin beta chain; Belongs to the spectrin family. (2436 aa)
APZ42_016448Dystrobrevin beta. (653 aa)
APZ42_031339Spectrin alpha chain, non-erythrocytic. (2414 aa)
APZ42_019570Teneurin-1. (2573 aa)
APZ42_013595Putative ELKS/Rab6-interacting/CAST family member 1. (1720 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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