(25 nodes) Defense response to virus network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_015042	Caseinolytic peptidase B protein suppressor of potassium transport defect. (630 aa)
	APZ42_013171	ABC protein, subfamily ABCF. (716 aa)
	APZ42_020951	Sterile alpha and TIR motif-containing protein 1. (1393 aa)
	APZ42_012541	Putative Forkhead box protein K2. (157 aa)
	APZ42_012425	Kinase suppressor of Ras 1. (978 aa)
	APZ42_012361	Forkhead box protein K2. (306 aa)
	APZ42_028576	Glucose-6-phosphate 1-epimerase. (189 aa)
	APZ42_027341	Stimulator of interferon genes protein. (389 aa)
	APZ42_025680	Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family. (958 aa)
	APZ42_025275	Putative Connector enhancer of kinase suppressor of ras 1. (1857 aa)
	APZ42_024495	Putative ATP-dependent RNA helicase DDX56. (561 aa)
	APZ42_022759	Uncharacterized protein. (259 aa)
	APZ42_020558	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. (416 aa)
	APZ42_022185	Putative Cytosolic carboxypeptidase protein 5. (867 aa)
	APZ42_027194	Exosome component 10. (822 aa)
	APZ42_024804	Putative Serine/arginine-rich splicing factor 4. (363 aa)
	EOG090X09DD	Exosome complex component RRP4. (292 aa)
	APZ42_023314	Exosome complex exonuclease RRP41. (246 aa)
	APZ42_023485	Putative Ankyrin repeat domain-containing protein 19. (1016 aa)
	APZ42_015990	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily. (431 aa)
	APZ42_022056	Inhibitor of nuclear factor kappa-B kinase subunit beta. (742 aa)
	APZ42_020568	Tyrosine-protein kinase. (587 aa)
	APZ42_020280	SON of sevenless protein. (1537 aa)
	APZ42_017491	HRDC domain-containing protein. (512 aa)
	APZ42_018704	Putative Zinc finger CCHC domain-containing protein. (746 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_012361	APZ42_012541	A0A162RWP5	A0A162RQ20	Forkhead box protein K2.	Putative Forkhead box protein K2.	0.899
APZ42_012361	APZ42_022056	A0A162RWP5	A0A0P5B9C1	Forkhead box protein K2.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.612
APZ42_012361	APZ42_027341	A0A162RWP5	A0A164RHL7	Forkhead box protein K2.	Stimulator of interferon genes protein.	0.626
APZ42_012425	APZ42_015990	A0A162RSW9	A0A0P5CCC7	Kinase suppressor of Ras 1.	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	0.991
APZ42_012425	APZ42_020280	A0A162RSW9	A0A164XL06	Kinase suppressor of Ras 1.	SON of sevenless protein.	0.556
APZ42_012425	APZ42_020558	A0A162RSW9	A0A162CBY6	Kinase suppressor of Ras 1.	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.660
APZ42_012425	APZ42_020568	A0A162RSW9	A0A164X7E9	Kinase suppressor of Ras 1.	Tyrosine-protein kinase.	0.611
APZ42_012425	APZ42_023485	A0A162RSW9	A0A0P5E9N4	Kinase suppressor of Ras 1.	Putative Ankyrin repeat domain-containing protein 19.	0.550
APZ42_012425	APZ42_025275	A0A162RSW9	A0A164T971	Kinase suppressor of Ras 1.	Putative Connector enhancer of kinase suppressor of ras 1.	0.881
APZ42_012425	APZ42_027341	A0A162RSW9	A0A164RHL7	Kinase suppressor of Ras 1.	Stimulator of interferon genes protein.	0.558
APZ42_012541	APZ42_012361	A0A162RQ20	A0A162RWP5	Putative Forkhead box protein K2.	Forkhead box protein K2.	0.899
APZ42_012541	APZ42_022056	A0A162RQ20	A0A0P5B9C1	Putative Forkhead box protein K2.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.612
APZ42_012541	APZ42_027341	A0A162RQ20	A0A164RHL7	Putative Forkhead box protein K2.	Stimulator of interferon genes protein.	0.626
APZ42_015990	APZ42_012425	A0A0P5CCC7	A0A162RSW9	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	Kinase suppressor of Ras 1.	0.991
APZ42_015990	APZ42_020280	A0A0P5CCC7	A0A164XL06	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	SON of sevenless protein.	0.532
APZ42_015990	APZ42_020558	A0A0P5CCC7	A0A162CBY6	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.753
APZ42_015990	APZ42_020568	A0A0P5CCC7	A0A164X7E9	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	Tyrosine-protein kinase.	0.711
APZ42_015990	APZ42_022056	A0A0P5CCC7	A0A0P5B9C1	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.716
APZ42_015990	APZ42_025275	A0A0P5CCC7	A0A164T971	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	Putative Connector enhancer of kinase suppressor of ras 1.	0.758
APZ42_017491	APZ42_018704	A0A164ZWF9	A0A164YSI2	HRDC domain-containing protein.	Putative Zinc finger CCHC domain-containing protein.	0.554