STRINGSTRING
APZ42_013766 APZ42_013766 APZ42_016661 APZ42_016661 APZ42_026413 APZ42_026413 APZ42_022227 APZ42_022227 EOG090X07N7 EOG090X07N7 APZ42_015656 APZ42_015656 APZ42_034375 APZ42_034375
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_013766Putative Nuclear pore complex protein Nup98-Nup96. (224 aa)
APZ42_016661DNA excision repair ERCC-6-like protein. (1184 aa)
APZ42_026413RNA polymerase II transcriptional coactivator. (125 aa)
APZ42_022227Nuclear pore complex protein Nup98-Nup96. (1843 aa)
EOG090X07N7SEC13 protein; Belongs to the WD repeat SEC13 family. (311 aa)
APZ42_015656Putative Transcription initiation factor TFIID subunit 3. (928 aa)
APZ42_03437526S Protease regulatory subunit 10B; Belongs to the AAA ATPase family. (389 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (34%) [HD]