(8 nodes) phosphatidylinositol-4-phosphate binding network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_032460	Golgi phosphoprotein 3 rotini. (291 aa)
	APZ42_018204	PH domain-containing protein. (234 aa)
	APZ42_018557	Protein patched. (1188 aa)
	APZ42_032407	SEC14 domain and spectrin repeat-containing protein 1. (970 aa)
	APZ42_032514	Collagen type IV alpha-3-binding protein. (623 aa)
	APZ42_034340	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1054 aa)
	APZ42_022515	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (566 aa)
	APZ42_013562	Arfaptin-2. (361 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_018557	APZ42_022515	A0A164Z0J9	A0A0P6G8F0	Protein patched.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.500
APZ42_018557	APZ42_034340	A0A164Z0J9	A0A164K3P3	Protein patched.	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.986
APZ42_022515	APZ42_018557	A0A0P6G8F0	A0A164Z0J9	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	Protein patched.	0.500
APZ42_022515	APZ42_034340	A0A0P6G8F0	A0A164K3P3	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.949
APZ42_034340	APZ42_018557	A0A164K3P3	A0A164Z0J9	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein patched.	0.986
APZ42_034340	APZ42_022515	A0A164K3P3	A0A0P6G8F0	Smoothened protein; Belongs to the G-protein coupled receptor Fz/Smo family.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.949