(14 nodes) Contractile ring network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_027135	Protein vav-like protein. (1151 aa)
	APZ42_027139	Putative Rho guanine nucleotide exchange factor. (808 aa)
	APZ42_011346	Macrophage erythroblast attacher. (447 aa)
	APZ42_015658	Putative Actin-binding protein anillin. (508 aa)
	APZ42_031916	Des-1 protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily. (324 aa)
	APZ42_012877	Protein GRAF. (960 aa)
	APZ42_011884	ALG-2 interacting protein X. (813 aa)
	APZ42_011341	Peanut protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (399 aa)
	APZ42_010944	CLIP-associating protein. (805 aa)
	APZ42_012797	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (867 aa)
	APZ42_026123	Alpha-ketoglutarate-dependent dioxygenase alkB; Belongs to the iron/ascorbate-dependent oxidoreductase family. (299 aa)
	APZ42_020362	Putative Actin-binding protein anillin. (624 aa)
	APZ42_015345	Charged multivesicular body protein 4B. (140 aa)
	APZ42_008239	Programmed cell death 6-interacting protein. (363 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_008239	APZ42_015345	A0A164ESN6	A0A162PEU0	Programmed cell death 6-interacting protein.	Charged multivesicular body protein 4B.	0.977
APZ42_010944	APZ42_011341	A0A162TBN6	A0A162SL05	CLIP-associating protein.	Peanut protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.516
APZ42_011341	APZ42_010944	A0A162SL05	A0A162TBN6	Peanut protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	CLIP-associating protein.	0.516
APZ42_011341	APZ42_015658	A0A162SL05	A0A162NTC1	Peanut protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Putative Actin-binding protein anillin.	0.726
APZ42_011341	APZ42_020362	A0A162SL05	A0A164XJT6	Peanut protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Putative Actin-binding protein anillin.	0.453
APZ42_011884	APZ42_015345	A0A162SEP4	A0A162PEU0	ALG-2 interacting protein X.	Charged multivesicular body protein 4B.	0.977
APZ42_012797	APZ42_015658	A0A0P5F4U9	A0A162NTC1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Putative Actin-binding protein anillin.	0.930
APZ42_012797	APZ42_020362	A0A0P5F4U9	A0A164XJT6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Putative Actin-binding protein anillin.	0.605
APZ42_015345	APZ42_008239	A0A162PEU0	A0A164ESN6	Charged multivesicular body protein 4B.	Programmed cell death 6-interacting protein.	0.977
APZ42_015345	APZ42_011884	A0A162PEU0	A0A162SEP4	Charged multivesicular body protein 4B.	ALG-2 interacting protein X.	0.977
APZ42_015658	APZ42_011341	A0A162NTC1	A0A162SL05	Putative Actin-binding protein anillin.	Peanut protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.726
APZ42_015658	APZ42_012797	A0A162NTC1	A0A0P5F4U9	Putative Actin-binding protein anillin.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.930
APZ42_020362	APZ42_011341	A0A164XJT6	A0A162SL05	Putative Actin-binding protein anillin.	Peanut protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.453
APZ42_020362	APZ42_012797	A0A164XJT6	A0A0P5F4U9	Putative Actin-binding protein anillin.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.605
APZ42_027135	APZ42_027139	A0A164RB99	A0A164RBB5	Protein vav-like protein.	Putative Rho guanine nucleotide exchange factor.	0.681
APZ42_027139	APZ42_027135	A0A164RBB5	A0A164RB99	Putative Rho guanine nucleotide exchange factor.	Protein vav-like protein.	0.681