(7 nodes) Lateral cell cortex network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_015074	Microtubule-actin cross-linking factor 1. (5007 aa)
	APZ42_016444	Putative Patronin. (1351 aa)
	APZ42_027666	Putative Stretchin-Mlck. (3857 aa)
	APZ42_029493	c-Myc promoter-binding protein. (1859 aa)
	APZ42_002464	Short spindle 4-like protein. (197 aa)
	APZ42_014019	Transcriptional coactivator YAP1. (461 aa)
	APZ42_027628	Death-associated protein kinase 2. (1311 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002464	APZ42_015074	A0A164I8Y6	A0A162P6X1	Short spindle 4-like protein.	Microtubule-actin cross-linking factor 1.	0.552
APZ42_015074	APZ42_002464	A0A162P6X1	A0A164I8Y6	Microtubule-actin cross-linking factor 1.	Short spindle 4-like protein.	0.552
APZ42_015074	APZ42_016444	A0A162P6X1	A0A165AFK8	Microtubule-actin cross-linking factor 1.	Putative Patronin.	0.552
APZ42_016444	APZ42_015074	A0A165AFK8	A0A162P6X1	Putative Patronin.	Microtubule-actin cross-linking factor 1.	0.552
APZ42_027628	APZ42_027666	A0A162D8J2	A0A164R5X4	Death-associated protein kinase 2.	Putative Stretchin-Mlck.	0.611
APZ42_027666	APZ42_027628	A0A164R5X4	A0A162D8J2	Putative Stretchin-Mlck.	Death-associated protein kinase 2.	0.611