(25 nodes) Plasma membrane invagination network (Daphnia magna)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_019812	ArfGAP with SH3 domain, ankyrin repeat and PH domain. (1103 aa)
	APZ42_017485	RAD50-interacting protein. (766 aa)
	APZ42_012877	Protein GRAF. (960 aa)
	APZ42_022687	Dual specificity mitogen-activated protein kinase kinase. (803 aa)
	APZ42_023127	Mitogen-activated protein kinase. (401 aa)
	APZ42_014248	Ras-related protein Rab-35. (201 aa)
	APZ42_019808	Phosphatidylinositol transfer protein alpha. (271 aa)
	APZ42_019415	XK-related protein. (464 aa)
	APZ42_028946	XK-related protein. (378 aa)
	APZ42_032460	Golgi phosphoprotein 3 rotini. (291 aa)
	APZ42_020656	Phosphatidylinositol transfer protein beta. (267 aa)
	APZ42_018321	XK-related protein. (541 aa)
	APZ42_019643	Phagocyte signaling-impaired protein. (945 aa)
	APZ42_000520	XK-related protein. (149 aa)
	APZ42_032152	Protein eiger-like protein; Belongs to the tumor necrosis factor family. (652 aa)
	APZ42_030510	Mekk1. (1578 aa)
	APZ42_030183	Uncharacterized protein. (332 aa)
	APZ42_029028	TE: Transposable element Tcb1 Transposase. (348 aa)
	APZ42_028675	Eater. (1100 aa)
	APZ42_014452	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (645 aa)
	APZ42_027873	Centromere/kinetochore protein zw10. (734 aa)
	APZ42_023179	Uncharacterized protein. (298 aa)
	APZ42_015348	XK-related protein. (739 aa)
	APZ42_015191	Rho-related BTB domain-containing protein 2. (718 aa)
	APZ42_032511	Syndapin. (495 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000520	APZ42_028946	A0A164JKM8	A0A0P5DLP8	XK-related protein.	XK-related protein.	0.420
APZ42_012877	APZ42_015191	A0A162RGG3	A0A162P9H3	Protein GRAF.	Rho-related BTB domain-containing protein 2.	0.589
APZ42_014248	APZ42_019812	A0A0P5ZIH4	A0A162CMB1	Ras-related protein Rab-35.	ArfGAP with SH3 domain, ankyrin repeat and PH domain.	0.809
APZ42_014452	APZ42_023179	A0A0N8D2H5	A0A164V5Y9	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Uncharacterized protein.	0.671
APZ42_014452	APZ42_029028	A0A0N8D2H5	A0A164PZA7	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	TE: Transposable element Tcb1 Transposase.	0.671
APZ42_014452	APZ42_030183	A0A0N8D2H5	A0A164P016	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Uncharacterized protein.	0.671
APZ42_015191	APZ42_012877	A0A162P9H3	A0A162RGG3	Rho-related BTB domain-containing protein 2.	Protein GRAF.	0.589
APZ42_015191	APZ42_019812	A0A162P9H3	A0A162CMB1	Rho-related BTB domain-containing protein 2.	ArfGAP with SH3 domain, ankyrin repeat and PH domain.	0.685
APZ42_015191	APZ42_022687	A0A162P9H3	A0A0P5ZN54	Rho-related BTB domain-containing protein 2.	Dual specificity mitogen-activated protein kinase kinase.	0.629
APZ42_015191	APZ42_023127	A0A162P9H3	A0A164V740	Rho-related BTB domain-containing protein 2.	Mitogen-activated protein kinase.	0.744
APZ42_017485	APZ42_027873	A0A0P6C1E8	A0A164QZG2	RAD50-interacting protein.	Centromere/kinetochore protein zw10.	0.999
APZ42_019812	APZ42_014248	A0A162CMB1	A0A0P5ZIH4	ArfGAP with SH3 domain, ankyrin repeat and PH domain.	Ras-related protein Rab-35.	0.809
APZ42_019812	APZ42_015191	A0A162CMB1	A0A162P9H3	ArfGAP with SH3 domain, ankyrin repeat and PH domain.	Rho-related BTB domain-containing protein 2.	0.685
APZ42_022687	APZ42_015191	A0A0P5ZN54	A0A162P9H3	Dual specificity mitogen-activated protein kinase kinase.	Rho-related BTB domain-containing protein 2.	0.629
APZ42_022687	APZ42_023127	A0A0P5ZN54	A0A164V740	Dual specificity mitogen-activated protein kinase kinase.	Mitogen-activated protein kinase.	0.997
APZ42_022687	APZ42_032152	A0A0P5ZN54	A0A164M6U4	Dual specificity mitogen-activated protein kinase kinase.	Protein eiger-like protein; Belongs to the tumor necrosis factor family.	0.489
APZ42_023127	APZ42_015191	A0A164V740	A0A162P9H3	Mitogen-activated protein kinase.	Rho-related BTB domain-containing protein 2.	0.744
APZ42_023127	APZ42_022687	A0A164V740	A0A0P5ZN54	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase.	0.997
APZ42_023127	APZ42_023179	A0A164V740	A0A164V5Y9	Mitogen-activated protein kinase.	Uncharacterized protein.	0.567
APZ42_023127	APZ42_029028	A0A164V740	A0A164PZA7	Mitogen-activated protein kinase.	TE: Transposable element Tcb1 Transposase.	0.567