(21 nodes) Nucleocytoplasmic carrier activity network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_025288	Transportin-1. (264 aa)
	APZ42_024904	Importin-4. (1079 aa)
	APZ42_022066	Putative Importin subunit beta-1. (588 aa)
	APZ42_020255	Transportin-1. (656 aa)
	APZ42_017606	Importin-9. (1027 aa)
	APZ42_017648	Exportin-1. (1075 aa)
	APZ42_011311	Uncharacterized protein. (438 aa)
	APZ42_005873	Exportin-5. (196 aa)
	APZ42_023463	Protein Hikeshi. (200 aa)
	APZ42_018670	Karyopherin importin beta. (885 aa)
	APZ42_012380	Importin subunit alpha-1. (534 aa)
	APZ42_029057	Exportin-6. (1125 aa)
	APZ42_012130	Importin-5. (663 aa)
	APZ42_013306	Putative Exportin-2. (1650 aa)
	APZ42_013550	Ran-binding protein 17. (1108 aa)
	APZ42_027868	Importin subunit alpha; Belongs to the importin alpha family. (521 aa)
	APZ42_012129	Importin-5. (389 aa)
	APZ42_034046	Exportin-4. (1127 aa)
	APZ42_029021	Importin subunit alpha; Belongs to the importin alpha family. (519 aa)
	APZ42_028384	Importin subunit beta. (888 aa)
	APZ42_026547	Exportin-5. (746 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_005873	APZ42_013306	A0A162BXC6	A0A162QWR0	Exportin-5.	Putative Exportin-2.	0.571
APZ42_005873	APZ42_013550	A0A162BXC6	A0A162QLX9	Exportin-5.	Ran-binding protein 17.	0.416
APZ42_005873	APZ42_017648	A0A162BXC6	A0A164ZZN0	Exportin-5.	Exportin-1.	0.489
APZ42_005873	APZ42_020255	A0A162BXC6	A0A164XMZ2	Exportin-5.	Transportin-1.	0.410
APZ42_005873	APZ42_024904	A0A162BXC6	A0A164TPG6	Exportin-5.	Importin-4.	0.507
APZ42_005873	APZ42_026547	A0A162BXC6	A0A164S5M8	Exportin-5.	Exportin-5.	0.808
APZ42_011311	APZ42_012129	A0A162CYY6	A0A162S484	Uncharacterized protein.	Importin-5.	0.439
APZ42_011311	APZ42_012130	A0A162CYY6	A0A162S471	Uncharacterized protein.	Importin-5.	0.439
APZ42_011311	APZ42_013306	A0A162CYY6	A0A162QWR0	Uncharacterized protein.	Putative Exportin-2.	0.401
APZ42_011311	APZ42_017648	A0A162CYY6	A0A164ZZN0	Uncharacterized protein.	Exportin-1.	0.458
APZ42_011311	APZ42_020255	A0A162CYY6	A0A164XMZ2	Uncharacterized protein.	Transportin-1.	0.434
APZ42_011311	APZ42_024904	A0A162CYY6	A0A164TPG6	Uncharacterized protein.	Importin-4.	0.560
APZ42_011311	APZ42_025288	A0A162CYY6	A0A164T9T4	Uncharacterized protein.	Transportin-1.	0.434
APZ42_011311	APZ42_029057	A0A162CYY6	A0A0P5TR95	Uncharacterized protein.	Exportin-6.	0.461
APZ42_012129	APZ42_011311	A0A162S484	A0A162CYY6	Importin-5.	Uncharacterized protein.	0.439
APZ42_012129	APZ42_012130	A0A162S484	A0A162S471	Importin-5.	Importin-5.	0.949
APZ42_012129	APZ42_012380	A0A162S484	A0A0P5X7K0	Importin-5.	Importin subunit alpha-1.	0.605
APZ42_012129	APZ42_013306	A0A162S484	A0A162QWR0	Importin-5.	Putative Exportin-2.	0.510
APZ42_012129	APZ42_017606	A0A162S484	A0A164ZYR5	Importin-5.	Importin-9.	0.439
APZ42_012129	APZ42_017648	A0A162S484	A0A164ZZN0	Importin-5.	Exportin-1.	0.558