(84 nodes) DNA-binding transcription factor binding network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_030961	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. (401 aa)
	APZ42_034380	F-box/WD repeat-containing protein TBL1XR1. (492 aa)
	APZ42_018322	Serum response factor-like protein. (389 aa)
	APZ42_028522	Putative SWI/SNF-related matrix-associated actin-dependent regulator chromatin subfamily E member. (701 aa)
	APZ42_011340	Putative Condensin-2 complex subunit G2. (1170 aa)
	APZ42_015851	Wd-repeat protein. (392 aa)
	APZ42_018001	Bardet-Biedl syndrome 2 protein homolog. (697 aa)
	APZ42_031956	F-box/WD repeat-containing TBL1XR1-like protein. (735 aa)
	APZ42_014288	Putative Cytokine receptor. (1289 aa)
	APZ42_022562	Nucleosome-remodeling factor subunit NURF301. (2231 aa)
	APZ42_027214	LIM domain only protein 3. (209 aa)
	APZ42_016157	UPF0389 protein. (127 aa)
	APZ42_028121	COMM domain-containing protein 7. (70 aa)
	APZ42_032869	UBX domain-containing protein 7. (477 aa)
	APZ42_022790	Uncharacterized protein. (1061 aa)
	APZ42_020642	Groucho-like protein. (622 aa)
	APZ42_018963	Expanded,-like protein. (261 aa)
	APZ42_003109	Putative Expanded protein. (220 aa)
	APZ42_030306	Groucho-like protein. (665 aa)
	APZ42_031134	Uncharacterized protein. (1044 aa)
	APZ42_031074	Putative Shn zinc finger protein. (1642 aa)
	APZ42_015896	WD repeat-containing protein 53. (396 aa)
	APZ42_016062	Putative wd-repeat protein. (376 aa)
	APZ42_015593	DUF4819 domain-containing protein. (759 aa)
	APZ42_015255	Lysine-specific demethylase 6A. (1264 aa)
	APZ42_013677	Histone chaperone asf1. (187 aa)
	APZ42_013658	BRCT domain-containing protein. (1286 aa)
	APZ42_012285	Putative Homeobox protein Nkx-6.2. (545 aa)
	APZ42_011549	Geminin. (202 aa)
	APZ42_010919	GATA-type domain-containing protein. (1643 aa)
	APZ42_010930	Grunge-like protein. (356 aa)
	APZ42_002704	Recombining binding protein suppressor of hairless. (127 aa)
	APZ42_002661	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member. (386 aa)
	APZ42_001657	Groucho-like protein. (88 aa)
	APZ42_000788	Putative Recombining binding protein suppressor of hairless. (118 aa)
	APZ42_034215	Uncharacterized protein. (222 aa)
	APZ42_033223	Putative Homrotic deformed protein. (462 aa)
	APZ42_033276	Putative Diacylglycerol kinase 1. (159 aa)
	APZ42_032934	Transcription factor capicua-like protein. (1283 aa)
	EOG090X04DO	COP9 signalosome complex subunit 2. (446 aa)
	APZ42_031138	Uncharacterized protein. (315 aa)
	APZ42_031130	Uncharacterized protein. (752 aa)
	APZ42_030819	Histone chaperone ASF1A. (193 aa)
	APZ42_030076	ATP-dependent Helicase brm. (1476 aa)
	APZ42_029519	Putative Insulin gene enhancer protein ISL-2. (500 aa)
	APZ42_029523	Putative Insulin gene enhancer protein ISL-1. (134 aa)
	APZ42_028482	ATP-dependent RNA Helicase DHX33. (229 aa)
	APZ42_027857	Uncharacterized protein. (138 aa)
	APZ42_027225	Bardet-Biedl Syndrome 7 protein. (119 aa)
	APZ42_027338	Putative CREB-binding protein. (2063 aa)
	APZ42_027377	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (894 aa)
	APZ42_026950	LIM domain only protein 3. (302 aa)
	EOG090X04KW	Putative MKL/myocardin protein 1. (1058 aa)
	APZ42_026050	Zinc finger protein ush. (1221 aa)
	APZ42_023421	RBR-type E3 ubiquitin transferase. (483 aa)
	APZ42_023419	ARID domain-containing protein. (101 aa)
	APZ42_023373	Retained, isoform b. (354 aa)
	APZ42_023336	Recombining binding protein suppressor of hairless. (577 aa)
	APZ42_022808	Tetratricopeptide repeat protein 8. (474 aa)
	APZ42_021600	Ex. (1593 aa)
	APZ42_021296	PNT domain-containing protein. (118 aa)
	APZ42_021237	Uncharacterized protein. (173 aa)
	APZ42_021138	General transcription factor IIH subunit 1. (567 aa)
	APZ42_019408	Putative CREB-regulated transcription coactivator 1. (711 aa)
	APZ42_018714	LIM domain transcription factor LMO4. (421 aa)
	APZ42_018366	Uncharacterized protein. (625 aa)
	APZ42_018393	AT-rich interactive domain-containing 4B-like protein. (1711 aa)
	APZ42_017919	Bromodomain adjacent to Zinc finger domain protein 2B. (2082 aa)
	APZ42_017332	Putative ATP-dependent RNA Helicase DHX33. (665 aa)
	APZ42_003663	Uncharacterized protein. (76 aa)
	APZ42_014821	Protein IWS1. (586 aa)
	APZ42_014562	26S proteasome non-ATPase regulatory subunit 9. (203 aa)
	APZ42_015155	E3 SUMO-protein ligase PIAS1. (674 aa)
	APZ42_014480	DDB1-and CUL4-associated factor 13. (452 aa)
	APZ42_015226	Bromodomain-containing protein. (849 aa)
	APZ42_012182	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member. (1043 aa)
	APZ42_026933	LIM domain only protein 3. (311 aa)
	APZ42_019530	Nuclear receptor-binding factor 2. (220 aa)
	APZ42_018957	F-box/WD repeat-containing TBL1XR1-like protein. (373 aa)
	APZ42_016143	Growth and transformation-dependent protein. (129 aa)
	APZ42_011336	C-terminal-binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (475 aa)
	APZ42_014019	Transcriptional coactivator YAP1. (461 aa)
	APZ42_033283	Alpha-aminoadipic semialdehyde synthase, mitochondrial. (952 aa)
	APZ42_032948	ETS-domain lacking. (117 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000788	APZ42_001657	A0A164JDM5	A0A164IUD9	Putative Recombining binding protein suppressor of hairless.	Groucho-like protein.	0.659
APZ42_000788	APZ42_003663	A0A164JDM5	A0A168EL79	Putative Recombining binding protein suppressor of hairless.	Uncharacterized protein.	0.515
APZ42_000788	APZ42_010919	A0A164JDM5	A0A162TAA6	Putative Recombining binding protein suppressor of hairless.	GATA-type domain-containing protein.	0.729
APZ42_000788	APZ42_010930	A0A164JDM5	A0A162TAB6	Putative Recombining binding protein suppressor of hairless.	Grunge-like protein.	0.729
APZ42_000788	APZ42_011336	A0A164JDM5	A0A0P5E3C9	Putative Recombining binding protein suppressor of hairless.	C-terminal-binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.874
APZ42_000788	APZ42_015851	A0A164JDM5	A0A0P5TDK4	Putative Recombining binding protein suppressor of hairless.	Wd-repeat protein.	0.515
APZ42_000788	APZ42_015896	A0A164JDM5	A0A162NEF8	Putative Recombining binding protein suppressor of hairless.	WD repeat-containing protein 53.	0.515
APZ42_000788	APZ42_016062	A0A164JDM5	A0A162NJW1	Putative Recombining binding protein suppressor of hairless.	Putative wd-repeat protein.	0.515
APZ42_000788	APZ42_018957	A0A164JDM5	A0A0P5CYP5	Putative Recombining binding protein suppressor of hairless.	F-box/WD repeat-containing TBL1XR1-like protein.	0.515
APZ42_000788	APZ42_020642	A0A164JDM5	A0A162CC84	Putative Recombining binding protein suppressor of hairless.	Groucho-like protein.	0.808
APZ42_000788	APZ42_022790	A0A164JDM5	A0A162C899	Putative Recombining binding protein suppressor of hairless.	Uncharacterized protein.	0.784
APZ42_000788	APZ42_027338	A0A164JDM5	A0A164RHI9	Putative Recombining binding protein suppressor of hairless.	Putative CREB-binding protein.	0.784
APZ42_000788	APZ42_027857	A0A164JDM5	A0A164R0J7	Putative Recombining binding protein suppressor of hairless.	Uncharacterized protein.	0.729
APZ42_000788	APZ42_030306	A0A164JDM5	A0A162D388	Putative Recombining binding protein suppressor of hairless.	Groucho-like protein.	0.808
APZ42_000788	APZ42_031956	A0A164JDM5	A0A0P5Z1P0	Putative Recombining binding protein suppressor of hairless.	F-box/WD repeat-containing TBL1XR1-like protein.	0.515
APZ42_000788	APZ42_034380	A0A164JDM5	A0A0P5QL58	Putative Recombining binding protein suppressor of hairless.	F-box/WD repeat-containing protein TBL1XR1.	0.515
APZ42_001657	APZ42_000788	A0A164IUD9	A0A164JDM5	Groucho-like protein.	Putative Recombining binding protein suppressor of hairless.	0.659
APZ42_001657	APZ42_002704	A0A164IUD9	A0A164I3H5	Groucho-like protein.	Recombining binding protein suppressor of hairless.	0.659
APZ42_001657	APZ42_011336	A0A164IUD9	A0A0P5E3C9	Groucho-like protein.	C-terminal-binding protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.760
APZ42_001657	APZ42_018366	A0A164IUD9	A0A164Z5Q8	Groucho-like protein.	Uncharacterized protein.	0.868