STRINGSTRING
APZ42_003890 APZ42_003890 APZ42_016362 APZ42_016362 APZ42_032134 APZ42_032134 APZ42_032645 APZ42_032645 APZ42_023540 APZ42_023540 APZ42_020560 APZ42_020560 APZ42_025988 APZ42_025988 APZ42_034133 APZ42_034133 APZ42_013664 APZ42_013664 APZ42_028288 APZ42_028288 APZ42_024909 APZ42_024909 APZ42_021632 APZ42_021632 APZ42_026673 APZ42_026673 APZ42_024426 APZ42_024426 EOG090X017X EOG090X017X APZ42_027415 APZ42_027415 APZ42_025064 APZ42_025064 PAN3 PAN3 EOG090X0FYD EOG090X0FYD EOG090X09DD EOG090X09DD APZ42_016913 APZ42_016913 EOG090X07B6 EOG090X07B6 EOG090X0489 EOG090X0489 APZ42_023324 APZ42_023324 APZ42_013893 APZ42_013893 APZ42_023527 APZ42_023527 APZ42_024075 APZ42_024075 APZ42_024804 APZ42_024804 APZ42_033979 APZ42_033979 APZ42_016490 APZ42_016490 EOG090X0770 EOG090X0770 EOG090X06V5 EOG090X06V5 APZ42_012906 APZ42_012906 APZ42_023758 APZ42_023758 APZ42_011505 APZ42_011505 APZ42_012392 APZ42_012392 EOG090X01R1 EOG090X01R1 APZ42_012848 APZ42_012848 APZ42_021643 APZ42_021643 APZ42_014605 APZ42_014605 APZ42_025066 APZ42_025066 APZ42_017735 APZ42_017735 APZ42_033253 APZ42_033253 APZ42_013175 APZ42_013175 APZ42_018665 APZ42_018665 APZ42_019444 APZ42_019444 APZ42_014947 APZ42_014947 APZ42_017061 APZ42_017061 APZ42_029134 APZ42_029134 APZ42_028638 APZ42_028638 APZ42_021634 APZ42_021634 APZ42_030268 APZ42_030268 APZ42_007247 APZ42_007247 APZ42_001903 APZ42_001903 APZ42_022861 APZ42_022861 APZ42_020916 APZ42_020916 APZ42_019357 APZ42_019357 EOG090X0ILG EOG090X0ILG APZ42_031615 APZ42_031615 APZ42_024544 APZ42_024544 APZ42_024300 APZ42_024300 APZ42_026058 APZ42_026058 APZ42_016138 APZ42_016138 APZ42_015659 APZ42_015659 APZ42_014948 APZ42_014948 EOG090X0CWA EOG090X0CWA APZ42_015303 APZ42_015303 APZ42_015347 APZ42_015347 APZ42_015346 APZ42_015346 APZ42_014755 APZ42_014755 APZ42_014609 APZ42_014609 APZ42_014002 APZ42_014002 APZ42_013906 APZ42_013906 APZ42_013877 APZ42_013877 APZ42_013677 APZ42_013677 APZ42_012842 APZ42_012842 APZ42_012837 APZ42_012837 APZ42_011344 APZ42_011344 APZ42_011461 APZ42_011461 LSM1 LSM1 APZ42_011793 APZ42_011793 APZ42_011797 APZ42_011797 EOG090X04JL EOG090X04JL APZ42_011062 APZ42_011062 APZ42_005050 APZ42_005050 APZ42_005047 APZ42_005047 APZ42_004675 APZ42_004675 APZ42_002936 APZ42_002936 APZ42_000020 APZ42_000020 APZ42_034079 APZ42_034079 APZ42_033322 APZ42_033322 APZ42_033288 APZ42_033288 APZ42_032788 APZ42_032788 APZ42_032180 APZ42_032180 APZ42_030819 APZ42_030819 APZ42_030472 APZ42_030472 APZ42_029664 APZ42_029664 APZ42_029594 APZ42_029594 APZ42_029281 APZ42_029281 APZ42_028962 APZ42_028962 APZ42_028252 APZ42_028252 APZ42_027885 APZ42_027885 APZ42_027569 APZ42_027569 APZ42_027197 APZ42_027197 APZ42_027248 APZ42_027248 APZ42_027337 APZ42_027337 APZ42_027380 APZ42_027380 APZ42_027383 APZ42_027383 APZ42_027020 APZ42_027020 APZ42_026665 APZ42_026665 APZ42_026680 APZ42_026680 APZ42_026508 APZ42_026508 APZ42_026175 APZ42_026175 APZ42_026150 APZ42_026150 APZ42_025991 APZ42_025991 APZ42_024747 APZ42_024747 APZ42_024658 APZ42_024658 APZ42_023762 APZ42_023762 APZ42_024163 APZ42_024163 APZ42_023267 APZ42_023267 APZ42_022994 APZ42_022994 EOG090X04VI EOG090X04VI APZ42_022734 APZ42_022734 APZ42_022865 APZ42_022865 APZ42_022854 APZ42_022854 APZ42_022236 APZ42_022236 APZ42_021683 APZ42_021683 APZ42_021626 APZ42_021626 APZ42_021549 APZ42_021549 APZ42_020620 APZ42_020620 APZ42_020461 APZ42_020461 APZ42_019442 APZ42_019442 APZ42_018743 APZ42_018743 APZ42_018784 APZ42_018784 APZ42_018583 APZ42_018583 APZ42_017699 APZ42_017699 APZ42_016910 APZ42_016910 APZ42_016298 APZ42_016298
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_003890ATP-dependent RNA Helicase me31b. (92 aa)
APZ42_016362N6-adenosine-methyltransferase subunit METTL14; Belongs to the MT-A70-like family. (427 aa)
APZ42_032134Pre-mRNA-processing factor 39. (788 aa)
APZ42_032645Exosome complex component RRP43. (389 aa)
APZ42_023540Uncharacterized protein. (452 aa)
APZ42_020560N6-adenosine-methyltransferase MT-A70-like protein; Belongs to the MT-A70-like family. (554 aa)
APZ42_025988Poly-binding-splicing factor half pint. (614 aa)
APZ42_034133Pre-mRNA-splicing factor ATP-dependent RNA Helicase DHX15. (1225 aa)
APZ42_013664Putative Serine/arginine-rich splicing factor 2. (235 aa)
APZ42_028288CUGBP Elav family member. (532 aa)
APZ42_024909PHD finger protein. (1818 aa)
APZ42_021632Cleavage and polyadenylation specificity factor subunit 7. (588 aa)
APZ42_026673Putative Serine/threonine-protein kinase srpk2. (591 aa)
APZ42_024426Putative Myelin expression factor 2. (629 aa)
EOG090X017XPre-mRNA-processing factor 6. (926 aa)
APZ42_027415Protein argonaute-1; Belongs to the argonaute family. (945 aa)
APZ42_025064CCR4-NOT transcription complex subunit. (2481 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (674 aa)
EOG090X0FYDPre-mRNA-splicing regulator female-lethal(2)D. (313 aa)
EOG090X09DDExosome complex component RRP4. (292 aa)
APZ42_016913Pentatricopeptide repeat-containing protein 2, mitochondrial. (403 aa)
EOG090X07B6mRNA-decapping enzyme 1B. (405 aa)
EOG090X0489Pre-mRNA-processing factor 19. (503 aa)
APZ42_023324Putative U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (446 aa)
APZ42_013893ATP-dependent RNA helicase DDX46. (990 aa)
APZ42_023527Uncharacterized protein. (460 aa)
APZ42_024075Putative Coiled-coil domain-containing protein 55. (391 aa)
APZ42_024804Putative Serine/arginine-rich splicing factor 4. (363 aa)
APZ42_033979Serine/arginine repetitive matrix 1-like protein. (702 aa)
APZ42_016490RNA-binding protein Nova-1. (571 aa)
EOG090X0770Pre-mRNA-splicing factor RBM22. (414 aa)
EOG090X06V5E3 ubiquitin-protein ligase Hakai. (351 aa)
APZ42_012906ATP-dependent RNA Helicase me31b; Belongs to the DEAD box helicase family. (450 aa)
APZ42_023758CCR4-NOT transcription complex subunit. (459 aa)
APZ42_011505Regulator of nonsense transcripts 1. (1129 aa)
APZ42_012392Putative FAST kinase domain-containing protein 1. (946 aa)
EOG090X01R1Crooked neck protein 1. (743 aa)
APZ42_012848Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. (473 aa)
APZ42_021643Splicing factor 3A subunit 1. (737 aa)
APZ42_0146052',5'-phosphodiesterase 12. (596 aa)
APZ42_025066Heterogeneous nuclear ribonucleoprotein F. (924 aa)
APZ42_017735Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (769 aa)
APZ42_033253Putative SAFB transcription modulator. (950 aa)
APZ42_013175Enhancer of mRNA-decapping protein 4. (1123 aa)
APZ42_018665Leucine-rich PPR motif-containing protein, mitochondrial. (1364 aa)
APZ42_019444ATP-dependent RNA helicase A protein. (1189 aa)
APZ42_014947Pre-mRNA-splicing factor SYF1. (851 aa)
APZ42_017061DNA-directed RNA polymerase II subunit RPB7. (172 aa)
APZ42_029134SRA stem-loop-interacting RNA-binding protein, mitochondrial. (340 aa)
APZ42_028638U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
APZ42_021634Serine/arginine-rich splicing factor. (162 aa)
APZ42_030268Exosome complex component RRP43. (276 aa)
APZ42_007247Uncharacterized protein. (207 aa)
APZ42_001903Protein BTG4. (207 aa)
APZ42_022861Second mitotic wave missing. (993 aa)
APZ42_020916Putative RNA-binding protein 39. (573 aa)
APZ42_019357Protein Smaug. (954 aa)
EOG090X0ILGEndothelial differentiation-related factor 1. (156 aa)
APZ42_031615Limkain-B1. (1035 aa)
APZ42_024544Putative CCR4-NOT transcription complex subunit. (733 aa)
APZ42_024300ATP-dependent RNA Helicase DDX17; Belongs to the DEAD box helicase family. (574 aa)
APZ42_026058KH domain-containing protein. (472 aa)
APZ42_016138Putative Splicing factor 1. (176 aa)
APZ42_015659Tetratricopeptide repeat protein 5. (428 aa)
APZ42_014948Putative Pumilio. (1214 aa)
EOG090X0CWAExosome complex component RRP42. (290 aa)
APZ42_015303Meckelin. (1091 aa)
APZ42_015347Protein virilizer. (2147 aa)
APZ42_015346Putative Zinc finger CCCH domain-containing protein 14. (630 aa)
APZ42_014755Putative Splicing factor U2af 38 kDa subunit. (327 aa)
APZ42_014609Nucleolysin TIAR. (247 aa)
APZ42_014002Protein FAM46A. (580 aa)
APZ42_013906PAB-dependent poly(A)-specific ribonuclease subunit PAN2. (1060 aa)
APZ42_013877Neuroblastoma-amplified sequence. (2366 aa)
APZ42_013677Histone chaperone asf1. (187 aa)
APZ42_012842CCHC-type domain-containing protein. (1377 aa)
APZ42_012837Protein argonaute-1. (925 aa)
APZ42_011344Putative RING finger and CCCH-type Zinc finger domain-containing protein 2. (875 aa)
APZ42_011461Uncharacterized protein. (835 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (137 aa)
APZ42_011793Uncharacterized protein. (2828 aa)
APZ42_011797Putative DAZ-associated protein 1. (461 aa)
EOG090X04JLU6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family. (448 aa)
APZ42_011062Poly-binding protein 3. (363 aa)
APZ42_005050Putative ATP-dependent RNA Helicase me31b. (158 aa)
APZ42_005047ATP-dependent RNA Helicase me31b. (121 aa)
APZ42_004675Held out wings-like protein. (192 aa)
APZ42_002936CUGBP ELAV family member 4. (43 aa)
APZ42_000020Serine/arginine-rich splicing factor 1. (209 aa)
APZ42_034079Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (2128 aa)
APZ42_033322YTH domain-containing family protein 1. (896 aa)
APZ42_033288Protein quaking. (332 aa)
APZ42_032788Putative FAST kinase domain-containing protein. (574 aa)
APZ42_032180Uncharacterized protein. (257 aa)
APZ42_030819Histone chaperone ASF1A. (193 aa)
APZ42_030472ATP-dependent RNA Helicase WM6. (391 aa)
APZ42_029664Putative RNA binding protein fox-1 2. (316 aa)
APZ42_029594Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (2155 aa)
APZ42_029281Transformer-2-like protein. (259 aa)
APZ42_028962Splicing factor 45. (381 aa)
APZ42_028252ELAV protein 2. (426 aa)
APZ42_027885Putative Serine/arginine-rich splicing factor 3. (233 aa)
APZ42_027569Bruno-3. (390 aa)
APZ42_027197LA-related protein 7. (514 aa)
APZ42_027248Helicase SKI2W. (1240 aa)
APZ42_027337Heterogeneous nuclear ribonucleoprotein K. (404 aa)
APZ42_027380SON protein. (602 aa)
APZ42_027383Muscleblind 1-like protein. (978 aa)
APZ42_027020Cold shock domain-containing protein. (156 aa)
APZ42_026665Putative Splicing factor. (546 aa)
APZ42_026680ATP-dependent RNA Helicase me31b; Belongs to the DEAD box helicase family. (303 aa)
APZ42_026508Survival of motor neuron-related-splicing factor 30. (237 aa)
APZ42_026175Serine/threonine-protein kinase SRPK1. (325 aa)
APZ42_026150CUGBP ELAV family member 4. (80 aa)
APZ42_025991PAT1 1 protein. (724 aa)
APZ42_024747Fragile X mental retardation Syndrome-related protein. (637 aa)
APZ42_024658mRNA-decapping enzyme 2. (365 aa)
APZ42_023762Zinc finger CCCH domain-containing protein 10. (430 aa)
APZ42_024163RNA binding protein fox-1 2. (229 aa)
APZ42_023267Uncharacterized protein. (631 aa)
APZ42_022994Exosome complex component RRP40. (242 aa)
EOG090X04VIEOG090X04VI. (767 aa)
APZ42_022734Putative RING and PHD-finger domain-containing protein. (1868 aa)
APZ42_022865Putative Bruno-3. (377 aa)
APZ42_022854Putative ATP-dependent RNA helicase DHX33. (1228 aa)
APZ42_022236Sans fille-like protein. (226 aa)
APZ42_021683Putative RNA-binding protein 1. (164 aa)
APZ42_021626CUGBP ELAV family member 2. (81 aa)
APZ42_021549CUGBP ELAV family member 4. (167 aa)
APZ42_020620Putative RNA-binding protein 38. (182 aa)
APZ42_020461Putative Ribonucleoprotein PTB-binding 2. (824 aa)
APZ42_019442Darkener of apricot-like protein; Belongs to the protein kinase superfamily. (400 aa)
APZ42_018743Far upstream element-binding protein 1. (736 aa)
APZ42_018784Protein RRP5. (1536 aa)
APZ42_018583Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. (352 aa)
APZ42_017699Zinc finger 36, C3H1 type 1-like protein. (379 aa)
APZ42_016910RRM domain-containing protein. (1633 aa)
APZ42_016298YTH domain-containing 1-like protein. (570 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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