STRINGSTRING
APZ42_028351 APZ42_028351 APZ42_015392 APZ42_015392 APZ42_021806 APZ42_021806 EOG090X0DHL EOG090X0DHL APZ42_024074 APZ42_024074 APZ42_018756 APZ42_018756 APZ42_013319 APZ42_013319 APZ42_012190 APZ42_012190 APZ42_017655 APZ42_017655 APZ42_016450 APZ42_016450 APZ42_014754 APZ42_014754 APZ42_017207 APZ42_017207 APZ42_034019 APZ42_034019 EOG090X0PCK EOG090X0PCK APZ42_022875 APZ42_022875 APZ42_013604 APZ42_013604 EOG090X0BPM EOG090X0BPM EOG090X0HZC EOG090X0HZC APZ42_010999 APZ42_010999 APZ42_014064 APZ42_014064 APZ42_013396 APZ42_013396 APZ42_031489 APZ42_031489 APZ42_000521 APZ42_000521 APZ42_014299 APZ42_014299 APZ42_020316 APZ42_020316 APZ42_026392 APZ42_026392 APZ42_027296 APZ42_027296 APZ42_018611 APZ42_018611 APZ42_012093 APZ42_012093 APZ42_017874 APZ42_017874 APZ42_028327 APZ42_028327 APZ42_013222 APZ42_013222 APZ42_017061 APZ42_017061 APZ42_011824 APZ42_011824 APZ42_011517 APZ42_011517 APZ42_022464 APZ42_022464 EOG090X0LKA EOG090X0LKA APZ42_008325 APZ42_008325 APZ42_002383 APZ42_002383 APZ42_001241 APZ42_001241 APZ42_032266 APZ42_032266 APZ42_004441 APZ42_004441 APZ42_015656 APZ42_015656 APZ42_014918 APZ42_014918 EOG090X080D EOG090X080D APZ42_015050 APZ42_015050 APZ42_014809 APZ42_014809 APZ42_013907 APZ42_013907 APZ42_013798 APZ42_013798 APZ42_013741 APZ42_013741 APZ42_013642 APZ42_013642 APZ42_013205 APZ42_013205 APZ42_011202 APZ42_011202 APZ42_006720 APZ42_006720 APZ42_005758 APZ42_005758 APZ42_005682 APZ42_005682 APZ42_005470 APZ42_005470 APZ42_003221 APZ42_003221 APZ42_002657 APZ42_002657 APZ42_002196 APZ42_002196 APZ42_001907 APZ42_001907 APZ42_001603 APZ42_001603 APZ42_001346 APZ42_001346 APZ42_001344 APZ42_001344 APZ42_034474 APZ42_034474 APZ42_033697 APZ42_033697 EOG090X0LBP EOG090X0LBP EOG090X0J86 EOG090X0J86 APZ42_030367 APZ42_030367 APZ42_029902 APZ42_029902 APZ42_029692 APZ42_029692 APZ42_029355 APZ42_029355 APZ42_028550 APZ42_028550 APZ42_028255 APZ42_028255 APZ42_027562 APZ42_027562 APZ42_027291 APZ42_027291 APZ42_026457 APZ42_026457 APZ42_026494 APZ42_026494 APZ42_024009 APZ42_024009 APZ42_024207 APZ42_024207 APZ42_022945 APZ42_022945 APZ42_021819 APZ42_021819 APZ42_021155 APZ42_021155 APZ42_021147 APZ42_021147 APZ42_020950 APZ42_020950 APZ42_019938 APZ42_019938 APZ42_019925 APZ42_019925 APZ42_019453 APZ42_019453 APZ42_019320 APZ42_019320 APZ42_019141 APZ42_019141 APZ42_018498 APZ42_018498 APZ42_018043 APZ42_018043 APZ42_017703 APZ42_017703 APZ42_017262 APZ42_017262 APZ42_017597 APZ42_017597 APZ42_016542 APZ42_016542 APZ42_016184 APZ42_016184
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_028351DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (698 aa)
APZ42_015392Transcription initiation factor TFIID subunit 8. (292 aa)
APZ42_021806RNA polymerase II-associated factor 1. (510 aa)
EOG090X0DHLDNA-directed RNA polymerase III subunit RPC8. (203 aa)
APZ42_024074YEATS domain-containing protein 4. (225 aa)
APZ42_018756DNA primase; Belongs to the eukaryotic-type primase small subunit family. (405 aa)
APZ42_013319DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (520 aa)
APZ42_012190Putative Another transcription unit protein. (588 aa)
APZ42_017655DNA-directed RNA polymerases I, II, and III subunit RPABC2. (129 aa)
APZ42_016450Putative Transcription initiation factor TFIID subunit 4. (997 aa)
APZ42_014754Transcription initiation factor IIa subunit 1. (325 aa)
APZ42_017207Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (280 aa)
APZ42_034019Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2. (450 aa)
EOG090X0PCKDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
APZ42_022875DNA-directed RNA polymerase III subunit RPC9. (125 aa)
APZ42_013604DNA-directed RNA polymerase I subunit RPA43. (684 aa)
EOG090X0BPMCDK-activating kinase assembly factor MAT1. (344 aa)
EOG090X0HZCTranscription initiation factor TFIID subunit 12. (136 aa)
APZ42_010999General transcription factor IIE subunit 1. (422 aa)
APZ42_014064Putative WD repeat-containing protein 47. (824 aa)
APZ42_013396DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1184 aa)
APZ42_031489Putative DNA-directed RNA polymerase I subunit RPA49. (408 aa)
APZ42_000521DNA-directed RNA polymerase II subunit. (268 aa)
APZ42_014299General transcription factor IIH subunit. (427 aa)
APZ42_020316DNA-directed RNA polymerase III subunit RPC3. (522 aa)
APZ42_026392TATA-box-binding protein. (311 aa)
APZ42_027296Transcription initiation factor TFIID subunit 7. (376 aa)
APZ42_018611TFIIH basal transcription factor complex helicase XPD subunit. (760 aa)
APZ42_012093DNA-directed RNA polymerase II subunit RPB3. (274 aa)
APZ42_017874Pterin-4-alpha-carbinolamine dehydratase. (130 aa)
APZ42_028327Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (379 aa)
APZ42_013222DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (326 aa)
APZ42_017061DNA-directed RNA polymerase II subunit RPB7. (172 aa)
APZ42_011824Uncharacterized protein. (153 aa)
APZ42_011517Parafibromin. (556 aa)
APZ42_022464DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (151 aa)
EOG090X0LKADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
APZ42_008325Uncharacterized protein. (67 aa)
APZ42_002383Putative DNA-directed RNA polymerase subunit beta. (107 aa)
APZ42_001241DNA-directed RNA polymerase. (144 aa)
APZ42_032266Transcription initiation factor IIA subunit 2. (159 aa)
APZ42_004441DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (133 aa)
APZ42_015656Putative Transcription initiation factor TFIID subunit 3. (928 aa)
APZ42_014918DNA-directed RNA polymerases I and III subunit RPAC1. (353 aa)
EOG090X080DEOG090X080D; Belongs to the cyclin family. (328 aa)
APZ42_015050Cyclin-dependent kinase 2-interacting protein. (201 aa)
APZ42_014809DNA-directed RNA polymerase. (246 aa)
APZ42_013907DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (454 aa)
APZ42_013798DNA-directed RNA polymerase III subunit RPC4. (444 aa)
APZ42_013741Putative DNA-directed RNA polymerase. (166 aa)
APZ42_013642Uncharacterized protein. (538 aa)
APZ42_013205DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1076 aa)
APZ42_011202Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (280 aa)
APZ42_006720DNA-directed RNA polymerase. (316 aa)
APZ42_005758DNA-directed RNA polymerase subunit beta. (86 aa)
APZ42_005682Putative DNA-directed RNA polymerase subunit beta. (88 aa)
APZ42_005470Putative DNA-directed RNA polymerase subunit beta. (120 aa)
APZ42_003221Putative DNA-directed RNA polymerase subunit beta. (107 aa)
APZ42_002657DNA-directed RNA polymerase subunit beta. (197 aa)
APZ42_002196Sigma54_CBD domain-containing protein. (177 aa)
APZ42_001907ZnF_CHCC domain-containing protein. (229 aa)
APZ42_001603DNA-directed RNA polymerase. (114 aa)
APZ42_001346DNA-directed RNA polymerase. (212 aa)
APZ42_001344DNA-directed RNA polymerase. (178 aa)
APZ42_034474RNA polymerase-associated protein CTR9. (1181 aa)
APZ42_033697DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (756 aa)
EOG090X0LBPPutative DNA-directed RNA polymerases I and III subunit RPAC2. (106 aa)
EOG090X0J86DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (127 aa)
APZ42_030367DNA-directed RNA polymerase. (436 aa)
APZ42_029902WD repeat-containing protein 61. (369 aa)
APZ42_029692General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (268 aa)
APZ42_029355DNA-directed RNA polymerase. (379 aa)
APZ42_028550DNA-directed RNA polymerase. (281 aa)
APZ42_028255DNA-directed RNA polymerases I. (265 aa)
APZ42_027562DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2202 aa)
APZ42_027291DNA polymerase. (1463 aa)
APZ42_026457DNA-directed RNA polymerase. (65 aa)
APZ42_026494DNA-directed RNA polymerases I, II, and III subunit RPABC4. (59 aa)
APZ42_024009Putative Transcription initiation factor TFIID subunit 2. (1846 aa)
APZ42_024207Transcription initiation factor TFIID subunit 5. (678 aa)
APZ42_022945DNA-directed RNA polymerase-like protein. (118 aa)
APZ42_021819Uncharacterized protein. (102 aa)
APZ42_021155Uncharacterized protein. (361 aa)
APZ42_021147Putative Transcription initiation factor TFIID subunit 11. (261 aa)
APZ42_020950DNA-directed RNA polymerase. (701 aa)
APZ42_019938Putative DNA-directed RNA polymerase. (48 aa)
APZ42_019925TATA box binding protein tbp-associated factor. (142 aa)
APZ42_019453Putative WD repeat-containing protein 3. (566 aa)
APZ42_019320Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (546 aa)
APZ42_019141Putative Regulation of nuclear pre-mRNA domain-containing protein 1B. (698 aa)
APZ42_018498RNA polymerase-associated protein Rtf1. (203 aa)
APZ42_018043Putative RNA polymerase-associated protein Rtf1. (520 aa)
APZ42_017703DNA-directed RNA polymerase; Belongs to the RNA polymerase beta chain family. (775 aa)
APZ42_017262DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1129 aa)
APZ42_017597DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1454 aa)
APZ42_016542Transcription initiation factor TFIID subunit 1. (1826 aa)
APZ42_016184Cyclin-dependent kinase 20. (195 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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