(31 nodes) Clathrin-coated vesicle network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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Predicted Interactions

gene neighborhood

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Your Input:
	APZ42_032686	Hemolectin. (4491 aa)
	APZ42_003320	Putative Huntingtin-interacting protein 1. (187 aa)
	APZ42_010869	Maspardin. (70 aa)
	APZ42_013666	Alpha-tocopherol transfer protein. (314 aa)
	APZ42_014592	Telomere length regulation protein TEL2. (1387 aa)
	APZ42_015272	Trans-Golgi network integral membrane 2-like protein. (546 aa)
	APZ42_015659	Tetratricopeptide repeat protein 5. (428 aa)
	APZ42_015724	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1060 aa)
	APZ42_016099	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	APZ42_029329	Putative Huntingtin interacting protein 1. (1369 aa)
	APZ42_020216	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (228 aa)
	APZ42_021444	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (866 aa)
	APZ42_020788	AP complex subunit beta. (927 aa)
	APZ42_027252	Phosphatidylinositide phosphatase SAC2. (1116 aa)
	APZ42_023544	Vesicular acetylcholine transporter-A. (637 aa)
	APZ42_018625	Phytanoyl-CoA dioxygenase domain-containing protein 1. (288 aa)
	APZ42_021231	Putative Maspardin. (138 aa)
	APZ42_028262	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (95 aa)
	APZ42_022199	Nucleoporin 2-like protein. (327 aa)
	APZ42_027008	Epsin-1. (598 aa)
	APZ42_026972	C-Jun-amino-terminal kinase-interacting protein 3. (1396 aa)
	APZ42_021392	NECAP-like protein. (276 aa)
	APZ42_019177	Clavesin-1. (263 aa)
	APZ42_011304	EF-hand calcium-binding domain-containing protein 4A. (806 aa)
	APZ42_024201	AP-1 complex subunit gamma. (912 aa)
	APZ42_019019	Cytoplasmic protein NCK1. (474 aa)
	APZ42_017963	Putative DENN domain-containing protein 1A. (772 aa)
	APZ42_015608	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (943 aa)
	APZ42_020753	Putative Alpha-tocopherol transfer protein. (151 aa)
	APZ42_002399	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (349 aa)
	APZ42_033882	Putative Lysosomal cobalamin transporter. (569 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002399	APZ42_003320	A0A164IAD9	A0A164HMA9	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Putative Huntingtin-interacting protein 1.	0.642
APZ42_002399	APZ42_014592	A0A164IAD9	A0A162PRB3	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Telomere length regulation protein TEL2.	0.431
APZ42_002399	APZ42_015608	A0A164IAD9	A0A0P5KQ01	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.925
APZ42_002399	APZ42_015724	A0A164IAD9	A0A162NQ33	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.833
APZ42_002399	APZ42_016099	A0A164IAD9	A0A162NMK5	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.659
APZ42_002399	APZ42_020216	A0A164IAD9	A0A162CEI2	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.873
APZ42_002399	APZ42_020788	A0A164IAD9	A0A0P6DXK2	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit beta.	0.995
APZ42_002399	APZ42_021392	A0A164IAD9	A0A164WP81	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	NECAP-like protein.	0.665
APZ42_002399	APZ42_024201	A0A164IAD9	A0A0P5LLS2	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.996
APZ42_002399	APZ42_028262	A0A164IAD9	A0A164QM97	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.485
APZ42_002399	APZ42_029329	A0A164IAD9	A0A162D572	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Putative Huntingtin interacting protein 1.	0.642
APZ42_003320	APZ42_002399	A0A164HMA9	A0A164IAD9	Putative Huntingtin-interacting protein 1.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.642
APZ42_003320	APZ42_015608	A0A164HMA9	A0A0P5KQ01	Putative Huntingtin-interacting protein 1.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.827
APZ42_003320	APZ42_015724	A0A164HMA9	A0A162NQ33	Putative Huntingtin-interacting protein 1.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.657
APZ42_003320	APZ42_016099	A0A164HMA9	A0A162NMK5	Putative Huntingtin-interacting protein 1.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.720
APZ42_003320	APZ42_020216	A0A164HMA9	A0A162CEI2	Putative Huntingtin-interacting protein 1.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.965
APZ42_003320	APZ42_020788	A0A164HMA9	A0A0P6DXK2	Putative Huntingtin-interacting protein 1.	AP complex subunit beta.	0.767
APZ42_003320	APZ42_021392	A0A164HMA9	A0A164WP81	Putative Huntingtin-interacting protein 1.	NECAP-like protein.	0.653
APZ42_003320	APZ42_024201	A0A164HMA9	A0A0P5LLS2	Putative Huntingtin-interacting protein 1.	AP-1 complex subunit gamma.	0.714
APZ42_003320	APZ42_027008	A0A164HMA9	A0A164RSK5	Putative Huntingtin-interacting protein 1.	Epsin-1.	0.848