(34 nodes) Endocytic vesicle network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	APZ42_016358	Coronin; Belongs to the WD repeat coronin family. (654 aa)
	APZ42_024423	Peptide transporter family 1. (409 aa)
	APZ42_024781	Ras-related protein Rab-14. (215 aa)
	APZ42_026061	Rh50; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (426 aa)
	APZ42_028682	Inositol polyphosphate 5-phosphatase OCRL-1. (788 aa)
	APZ42_032936	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (646 aa)
	APZ42_033882	Putative Lysosomal cobalamin transporter. (569 aa)
	APZ42_034299	Solute carrier family 15 member 2. (751 aa)
	APZ42_034305	Peptide transporter family 1. (506 aa)
	APZ42_034406	Uncharacterized protein. (621 aa)
	APZ42_013015	ADAM 17 Protease. (750 aa)
	APZ42_013747	Uncharacterized protein. (283 aa)
	APZ42_013830	Putative Stonin-1. (1840 aa)
	APZ42_014344	Toll receptor 6-like protein. (882 aa)
	APZ42_016099	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	APZ42_015795	Solute carrier family 15 member 4. (585 aa)
	APZ42_025136	Delta-like protein. (148 aa)
	APZ42_020788	AP complex subunit beta. (927 aa)
	APZ42_027252	Phosphatidylinositide phosphatase SAC2. (1116 aa)
	APZ42_021841	Ras-related protein Rab-7a. (208 aa)
	APZ42_020604	Chloride channel protein. (811 aa)
	APZ42_031766	Coronin; Belongs to the WD repeat coronin family. (653 aa)
	APZ42_023544	Vesicular acetylcholine transporter-A. (637 aa)
	APZ42_034298	Solute carrier family 15 member 2. (728 aa)
	APZ42_014537	Vesicle-associated membrane protein 4. (135 aa)
	APZ42_031701	Protein amnionless. (692 aa)
	APZ42_015608	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (943 aa)
	APZ42_013946	Ammonium transporter Rh type C; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (522 aa)
	APZ42_013943	Ammonium transporter Rh type C; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (488 aa)
	APZ42_029884	Coronin; Belongs to the WD repeat coronin family. (552 aa)
	APZ42_022454	Putative Ras and Rab interactor 2. (1320 aa)
	APZ42_020115	Rab5 GDP/GTP exchange factor. (662 aa)
	APZ42_024197	Ras-related protein Rab-5C. (227 aa)
	APZ42_023801	PH domain-containing protein. (784 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_013015	APZ42_025136	A0A162R8V1	A0A162DDU3	ADAM 17 Protease.	Delta-like protein.	0.555
APZ42_013015	APZ42_032936	A0A162R8V1	A0A164LJ80	ADAM 17 Protease.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.555
APZ42_013830	APZ42_014537	A0A162QGF6	A0A0P5WNA0	Putative Stonin-1.	Vesicle-associated membrane protein 4.	0.716
APZ42_013830	APZ42_015608	A0A162QGF6	A0A0P5KQ01	Putative Stonin-1.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.789
APZ42_013830	APZ42_016099	A0A162QGF6	A0A162NMK5	Putative Stonin-1.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.829
APZ42_013830	APZ42_020788	A0A162QGF6	A0A0P6DXK2	Putative Stonin-1.	AP complex subunit beta.	0.748
APZ42_013830	APZ42_023544	A0A162QGF6	A0A0P5XI13	Putative Stonin-1.	Vesicular acetylcholine transporter-A.	0.678
APZ42_014537	APZ42_013830	A0A0P5WNA0	A0A162QGF6	Vesicle-associated membrane protein 4.	Putative Stonin-1.	0.716
APZ42_014537	APZ42_015608	A0A0P5WNA0	A0A0P5KQ01	Vesicle-associated membrane protein 4.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.752
APZ42_014537	APZ42_016099	A0A0P5WNA0	A0A162NMK5	Vesicle-associated membrane protein 4.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.691
APZ42_014537	APZ42_020788	A0A0P5WNA0	A0A0P6DXK2	Vesicle-associated membrane protein 4.	AP complex subunit beta.	0.749
APZ42_014537	APZ42_021841	A0A0P5WNA0	A0A0P5Z2T4	Vesicle-associated membrane protein 4.	Ras-related protein Rab-7a.	0.437
APZ42_014537	APZ42_023544	A0A0P5WNA0	A0A0P5XI13	Vesicle-associated membrane protein 4.	Vesicular acetylcholine transporter-A.	0.669
APZ42_015608	APZ42_013830	A0A0P5KQ01	A0A162QGF6	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Putative Stonin-1.	0.789
APZ42_015608	APZ42_014537	A0A0P5KQ01	A0A0P5WNA0	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Vesicle-associated membrane protein 4.	0.752
APZ42_015608	APZ42_016099	A0A0P5KQ01	A0A162NMK5	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
APZ42_015608	APZ42_020788	A0A0P5KQ01	A0A0P6DXK2	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	AP complex subunit beta.	0.999
APZ42_015608	APZ42_024197	A0A0P5KQ01	A0A164UJQ4	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Ras-related protein Rab-5C.	0.723
APZ42_015608	APZ42_024781	A0A0P5KQ01	A0A164TRN1	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Ras-related protein Rab-14.	0.466
APZ42_015608	APZ42_028682	A0A0P5KQ01	A0A164QBN1	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Inositol polyphosphate 5-phosphatase OCRL-1.	0.653