(47 nodes) Nuclear membrane network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_033086	Sentrin-specific protease. (677 aa)
	APZ42_016558	Nuclear envelope membrane protein. (291 aa)
	APZ42_027438	Nuclear envelope phosphatase-regulatory subunit 1. (125 aa)
	APZ42_022227	Nuclear pore complex protein Nup98-Nup96. (1843 aa)
	APZ42_030439	Longevity assurance factor 1 lag1. (371 aa)
	APZ42_021012	Putative Macoilin. (811 aa)
	APZ42_020760	Glycolipid transfer protein domain-containing protein. (212 aa)
	APZ42_030445	Longevity assurance factor 1 lag1. (295 aa)
	APZ42_023172	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (642 aa)
	APZ42_023133	GDP-D-glucose phosphorylase 1. (340 aa)
	APZ42_024166	Putative Sentrin-specific protease. (303 aa)
	APZ42_025180	Putative Bifocal. (1125 aa)
	APZ42_018369	LBR_tudor domain-containing protein. (208 aa)
	APZ42_016953	Putative Nucleoporin NDC1. (311 aa)
	APZ42_017648	Exportin-1. (1075 aa)
	APZ42_018312	Muscle-specific protein. (5333 aa)
	APZ42_019242	DUF4205 domain-containing protein. (415 aa)
	APZ42_019243	DUF4205 domain-containing protein. (403 aa)
	APZ42_019240	DUF4205 domain-containing protein. (520 aa)
	APZ42_020284	Dumpy-19 protein. (713 aa)
	APZ42_020656	Phosphatidylinositol transfer protein beta. (267 aa)
	APZ42_022865	Putative Bruno-3. (377 aa)
	APZ42_022425	GDP-D-glucose phosphorylase 1. (357 aa)
	APZ42_026610	Putative SUN domain-containing protein 1. (627 aa)
	APZ42_026668	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (915 aa)
	APZ42_029763	KASH domain-containing protein. (1068 aa)
	APZ42_031202	CS domain-containing protein. (170 aa)
	APZ42_030570	Uncharacterized protein. (428 aa)
	APZ42_032786	Inner nuclear membrane Man1-like protein. (654 aa)
	APZ42_002518	Putative 7-dehydrocholesterol reductase. (340 aa)
	APZ42_002843	Putative 6-phosphofructokinase. (102 aa)
	APZ42_012842	CCHC-type domain-containing protein. (1377 aa)
	APZ42_013351	Sterol regulatory element-binding protein 1. (1161 aa)
	APZ42_013766	Putative Nuclear pore complex protein Nup98-Nup96. (224 aa)
	APZ42_014162	Putative Histone deacetylase silent information regulator protein Sir2. (600 aa)
	APZ42_015551	Putative Cyclooxygenase. (987 aa)
	APZ42_016114	Ankyrin repeat domain-containing protein 39. (174 aa)
	APZ42_023707	Transmembrane protein 120A. (409 aa)
	APZ42_018311	Muscle-specific-like protein. (5915 aa)
	APZ42_025063	14-3-3 protein zeta/delta; Belongs to the 14-3-3 family. (247 aa)
	APZ42_026528	Longevity assurance protein. (393 aa)
	APZ42_015860	Cytochrome c oxidase assembly protein. (135 aa)
	APZ42_019808	Phosphatidylinositol transfer protein alpha. (271 aa)
	APZ42_030296	7-dehydrocholesterol reductase. (451 aa)
	APZ42_033261	Nuclear envelope integral membrane protein 1. (445 aa)
	APZ42_017611	Lamina-associated polypeptide. (330 aa)
	APZ42_028690	THO complex subunit 4-A. (246 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002518	APZ42_030296	A0A164I7R6	A0A0P5X9X2	Putative 7-dehydrocholesterol reductase.	7-dehydrocholesterol reductase.	0.699
APZ42_002518	APZ42_032786	A0A164I7R6	A0A164LWJ8	Putative 7-dehydrocholesterol reductase.	Inner nuclear membrane Man1-like protein.	0.753
APZ42_002843	APZ42_017648	A0A164I030	A0A164ZZN0	Putative 6-phosphofructokinase.	Exportin-1.	0.659
APZ42_013351	APZ42_014162	A0A162QXQ0	A0A162Q0V9	Sterol regulatory element-binding protein 1.	Putative Histone deacetylase silent information regulator protein Sir2.	0.785
APZ42_013351	APZ42_030296	A0A162QXQ0	A0A0P5X9X2	Sterol regulatory element-binding protein 1.	7-dehydrocholesterol reductase.	0.440
APZ42_013766	APZ42_016953	A0A162QIP0	A0A165A9R2	Putative Nuclear pore complex protein Nup98-Nup96.	Putative Nucleoporin NDC1.	0.849
APZ42_013766	APZ42_017648	A0A162QIP0	A0A164ZZN0	Putative Nuclear pore complex protein Nup98-Nup96.	Exportin-1.	0.902
APZ42_013766	APZ42_023172	A0A162QIP0	A0A0N8CSH8	Putative Nuclear pore complex protein Nup98-Nup96.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.968
APZ42_013766	APZ42_026668	A0A162QIP0	A0A164S396	Putative Nuclear pore complex protein Nup98-Nup96.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.973
APZ42_013766	APZ42_028690	A0A162QIP0	A0A0P5MZK4	Putative Nuclear pore complex protein Nup98-Nup96.	THO complex subunit 4-A.	0.731
APZ42_014162	APZ42_013351	A0A162Q0V9	A0A162QXQ0	Putative Histone deacetylase silent information regulator protein Sir2.	Sterol regulatory element-binding protein 1.	0.785
APZ42_014162	APZ42_016114	A0A162Q0V9	A0A162NLF3	Putative Histone deacetylase silent information regulator protein Sir2.	Ankyrin repeat domain-containing protein 39.	0.582
APZ42_014162	APZ42_017611	A0A162Q0V9	A0A0P5T845	Putative Histone deacetylase silent information regulator protein Sir2.	Lamina-associated polypeptide.	0.445
APZ42_014162	APZ42_025180	A0A162Q0V9	A0A162DDQ7	Putative Histone deacetylase silent information regulator protein Sir2.	Putative Bifocal.	0.445
APZ42_015551	APZ42_031202	A0A162NVG0	A0A164N1J4	Putative Cyclooxygenase.	CS domain-containing protein.	0.946
APZ42_016114	APZ42_014162	A0A162NLF3	A0A162Q0V9	Ankyrin repeat domain-containing protein 39.	Putative Histone deacetylase silent information regulator protein Sir2.	0.582
APZ42_016114	APZ42_026610	A0A162NLF3	A0A164S3V6	Ankyrin repeat domain-containing protein 39.	Putative SUN domain-containing protein 1.	0.438
APZ42_016953	APZ42_013766	A0A165A9R2	A0A162QIP0	Putative Nucleoporin NDC1.	Putative Nuclear pore complex protein Nup98-Nup96.	0.849
APZ42_016953	APZ42_022227	A0A165A9R2	A0A0P5EGA2	Putative Nucleoporin NDC1.	Nuclear pore complex protein Nup98-Nup96.	0.849
APZ42_016953	APZ42_023172	A0A165A9R2	A0A0N8CSH8	Putative Nucleoporin NDC1.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.971