(16 nodes) Phagocytic vesicle network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	APZ42_029884	Coronin; Belongs to the WD repeat coronin family. (552 aa)
	APZ42_016358	Coronin; Belongs to the WD repeat coronin family. (654 aa)
	APZ42_034298	Solute carrier family 15 member 2. (728 aa)
	APZ42_031766	Coronin; Belongs to the WD repeat coronin family. (653 aa)
	APZ42_020604	Chloride channel protein. (811 aa)
	APZ42_021841	Ras-related protein Rab-7a. (208 aa)
	APZ42_015795	Solute carrier family 15 member 4. (585 aa)
	APZ42_014344	Toll receptor 6-like protein. (882 aa)
	APZ42_013747	Uncharacterized protein. (283 aa)
	APZ42_034305	Peptide transporter family 1. (506 aa)
	APZ42_034299	Solute carrier family 15 member 2. (751 aa)
	APZ42_028682	Inositol polyphosphate 5-phosphatase OCRL-1. (788 aa)
	APZ42_024781	Ras-related protein Rab-14. (215 aa)
	APZ42_024423	Peptide transporter family 1. (409 aa)
	APZ42_023801	PH domain-containing protein. (784 aa)
	APZ42_024197	Ras-related protein Rab-5C. (227 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_020604	APZ42_028682	A0A0P5YZ51	A0A164QBN1	Chloride channel protein.	Inositol polyphosphate 5-phosphatase OCRL-1.	0.572
APZ42_021841	APZ42_023801	A0A0P5Z2T4	A0A164U609	Ras-related protein Rab-7a.	PH domain-containing protein.	0.507
APZ42_021841	APZ42_024197	A0A0P5Z2T4	A0A164UJQ4	Ras-related protein Rab-7a.	Ras-related protein Rab-5C.	0.876
APZ42_021841	APZ42_024781	A0A0P5Z2T4	A0A164TRN1	Ras-related protein Rab-7a.	Ras-related protein Rab-14.	0.718
APZ42_023801	APZ42_021841	A0A164U609	A0A0P5Z2T4	PH domain-containing protein.	Ras-related protein Rab-7a.	0.507
APZ42_023801	APZ42_024197	A0A164U609	A0A164UJQ4	PH domain-containing protein.	Ras-related protein Rab-5C.	0.407
APZ42_023801	APZ42_024781	A0A164U609	A0A164TRN1	PH domain-containing protein.	Ras-related protein Rab-14.	0.565
APZ42_024197	APZ42_021841	A0A164UJQ4	A0A0P5Z2T4	Ras-related protein Rab-5C.	Ras-related protein Rab-7a.	0.876
APZ42_024197	APZ42_023801	A0A164UJQ4	A0A164U609	Ras-related protein Rab-5C.	PH domain-containing protein.	0.407
APZ42_024197	APZ42_024781	A0A164UJQ4	A0A164TRN1	Ras-related protein Rab-5C.	Ras-related protein Rab-14.	0.751
APZ42_024197	APZ42_028682	A0A164UJQ4	A0A164QBN1	Ras-related protein Rab-5C.	Inositol polyphosphate 5-phosphatase OCRL-1.	0.859
APZ42_024781	APZ42_021841	A0A164TRN1	A0A0P5Z2T4	Ras-related protein Rab-14.	Ras-related protein Rab-7a.	0.718
APZ42_024781	APZ42_023801	A0A164TRN1	A0A164U609	Ras-related protein Rab-14.	PH domain-containing protein.	0.565
APZ42_024781	APZ42_024197	A0A164TRN1	A0A164UJQ4	Ras-related protein Rab-14.	Ras-related protein Rab-5C.	0.751
APZ42_024781	APZ42_028682	A0A164TRN1	A0A164QBN1	Ras-related protein Rab-14.	Inositol polyphosphate 5-phosphatase OCRL-1.	0.564
APZ42_028682	APZ42_020604	A0A164QBN1	A0A0P5YZ51	Inositol polyphosphate 5-phosphatase OCRL-1.	Chloride channel protein.	0.572
APZ42_028682	APZ42_024197	A0A164QBN1	A0A164UJQ4	Inositol polyphosphate 5-phosphatase OCRL-1.	Ras-related protein Rab-5C.	0.859
APZ42_028682	APZ42_024781	A0A164QBN1	A0A164TRN1	Inositol polyphosphate 5-phosphatase OCRL-1.	Ras-related protein Rab-14.	0.564