(23 nodes) SAGA-type complex network (Daphnia magna)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	APZ42_023458	Transcriptional adapter 3. (472 aa)
	APZ42_016587	Transcriptional adapter. (387 aa)
	APZ42_018033	Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (3241 aa)
	APZ42_027379	Transcription initiation factor TFIID subunit 6. (601 aa)
	APZ42_028293	Putative Cysteine-rich protein 2-binding protein. (517 aa)
	EOG090X0HZC	Transcription initiation factor TFIID subunit 12. (136 aa)
	APZ42_021853	ZZ-type zinc finger-containing protein. (413 aa)
	APZ42_014504	Transcription initiation factor TFIID subunit 9. (229 aa)
	EOG090X0A1W	SAGA-associated factor 29. (287 aa)
	APZ42_032857	DNA damage-binding protein 1. (1215 aa)
	APZ42_015909	Putative Transcription initiation protein SPT3. (154 aa)
	APZ42_015613	Putative Kelch domain-containing protein 2. (1468 aa)
	APZ42_014606	STAGA complex 65 subunit gamma. (357 aa)
	APZ42_013561	TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein. (534 aa)
	APZ42_011434	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (225 aa)
	APZ42_024207	Transcription initiation factor TFIID subunit 5. (678 aa)
	APZ42_022377	Putative Transcription factor SPT20. (1093 aa)
	APZ42_022569	Ubiquitin carboxyl-terminal hydrolase. (500 aa)
	APZ42_022877	Transcriptional adapter 1. (333 aa)
	APZ42_020877	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3887 aa)
	APZ42_020740	Histone acetyltransferase KAT2A. (745 aa)
	APZ42_019453	Putative WD repeat-containing protein 3. (566 aa)
	APZ42_019496	Transcriptional adapter 2-beta. (629 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_011434	APZ42_013561	A0A162SNE3	A0A162QL97	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein.	0.943
APZ42_011434	APZ42_014504	A0A162SNE3	A0A0P5UWN3	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Transcription initiation factor TFIID subunit 9.	0.975
APZ42_011434	APZ42_014606	A0A162SNE3	A0A162PRC3	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	STAGA complex 65 subunit gamma.	0.949
APZ42_011434	APZ42_015909	A0A162SNE3	A0A162NER6	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Putative Transcription initiation protein SPT3.	0.984
APZ42_011434	APZ42_016587	A0A162SNE3	A0A0N7ZJ05	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Transcriptional adapter.	0.556
APZ42_011434	APZ42_019453	A0A162SNE3	A0A164Y5Z6	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Putative WD repeat-containing protein 3.	0.938
APZ42_011434	APZ42_020740	A0A162SNE3	A0A164XD17	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Histone acetyltransferase KAT2A.	0.899
APZ42_011434	APZ42_020877	A0A162SNE3	A0A164X5D9	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.	0.989
APZ42_011434	APZ42_022377	A0A162SNE3	A0A164VGT7	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Putative Transcription factor SPT20.	0.988
APZ42_011434	APZ42_022569	A0A162SNE3	A0A164VLS5	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Ubiquitin carboxyl-terminal hydrolase.	0.990
APZ42_011434	APZ42_023458	A0A162SNE3	A0A164UWP5	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Transcriptional adapter 3.	0.989
APZ42_011434	APZ42_024207	A0A162SNE3	A0A164UJL5	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Transcription initiation factor TFIID subunit 5.	0.938
APZ42_011434	APZ42_027379	A0A162SNE3	A0A0P5CCY5	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Transcription initiation factor TFIID subunit 6.	0.787
APZ42_011434	EOG090X0A1W	A0A162SNE3	A0A0P5WZC7	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	SAGA-associated factor 29.	0.955
APZ42_011434	EOG090X0HZC	A0A162SNE3	A0A0P5JXH8	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	Transcription initiation factor TFIID subunit 12.	0.990
APZ42_013561	APZ42_011434	A0A162QL97	A0A162SNE3	TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein.	SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.	0.943
APZ42_013561	APZ42_014504	A0A162QL97	A0A0P5UWN3	TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein.	Transcription initiation factor TFIID subunit 9.	0.989
APZ42_013561	APZ42_014606	A0A162QL97	A0A162PRC3	TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein.	STAGA complex 65 subunit gamma.	0.991
APZ42_013561	APZ42_015909	A0A162QL97	A0A162NER6	TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein.	Putative Transcription initiation protein SPT3.	0.987
APZ42_013561	APZ42_016587	A0A162QL97	A0A0N7ZJ05	TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein.	Transcriptional adapter.	0.945