(12 nodes) Endoplasmic reticulum exit site network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_011545	Protein transport Sec16A-like protein. (2112 aa)
	APZ42_013796	Uncharacterized protein. (1206 aa)
	APZ42_019750	Transport Sec24B,-like protein. (400 aa)
	APZ42_019396	Transport protein Sec31A. (1244 aa)
	APZ42_030563	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (803 aa)
	APZ42_017724	Putative cTAGE family member 5. (1716 aa)
	APZ42_013606	TRK-fused protein. (421 aa)
	APZ42_019265	Protein YIPF. (286 aa)
	APZ42_021533	Transport protein Sec24B protein. (210 aa)
	APZ42_023261	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (192 aa)
	APZ42_030314	Uncharacterized protein. (1134 aa)
	APZ42_033286	Protein transport protein Sec24C. (1058 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_011545	APZ42_013606	A0A162SSN7	A0A0N8CWW1	Protein transport Sec16A-like protein.	TRK-fused protein.	0.870
APZ42_011545	APZ42_013796	A0A162SSN7	A0A162QFE9	Protein transport Sec16A-like protein.	Uncharacterized protein.	0.964
APZ42_011545	APZ42_017724	A0A162SSN7	A0A164ZLY8	Protein transport Sec16A-like protein.	Putative cTAGE family member 5.	0.616
APZ42_011545	APZ42_019396	A0A162SSN7	A0A0P5ZWL8	Protein transport Sec16A-like protein.	Transport protein Sec31A.	0.953
APZ42_011545	APZ42_019750	A0A162SSN7	A0A162CM36	Protein transport Sec16A-like protein.	Transport Sec24B,-like protein.	0.964
APZ42_011545	APZ42_021533	A0A162SSN7	A0A164WKY7	Protein transport Sec16A-like protein.	Transport protein Sec24B protein.	0.964
APZ42_011545	APZ42_023261	A0A162SSN7	A0A164V2T5	Protein transport Sec16A-like protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.938
APZ42_011545	APZ42_030563	A0A162SSN7	A0A0P5E3T1	Protein transport Sec16A-like protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.993
APZ42_011545	APZ42_033286	A0A162SSN7	A0A164L8C2	Protein transport Sec16A-like protein.	Protein transport protein Sec24C.	0.990
APZ42_013606	APZ42_011545	A0A0N8CWW1	A0A162SSN7	TRK-fused protein.	Protein transport Sec16A-like protein.	0.870
APZ42_013606	APZ42_013796	A0A0N8CWW1	A0A162QFE9	TRK-fused protein.	Uncharacterized protein.	0.683
APZ42_013606	APZ42_019396	A0A0N8CWW1	A0A0P5ZWL8	TRK-fused protein.	Transport protein Sec31A.	0.892
APZ42_013606	APZ42_019750	A0A0N8CWW1	A0A162CM36	TRK-fused protein.	Transport Sec24B,-like protein.	0.683
APZ42_013606	APZ42_021533	A0A0N8CWW1	A0A164WKY7	TRK-fused protein.	Transport protein Sec24B protein.	0.683
APZ42_013606	APZ42_023261	A0A0N8CWW1	A0A164V2T5	TRK-fused protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.715
APZ42_013606	APZ42_030563	A0A0N8CWW1	A0A0P5E3T1	TRK-fused protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.761
APZ42_013606	APZ42_033286	A0A0N8CWW1	A0A164L8C2	TRK-fused protein.	Protein transport protein Sec24C.	0.712
APZ42_013796	APZ42_011545	A0A162QFE9	A0A162SSN7	Uncharacterized protein.	Protein transport Sec16A-like protein.	0.964
APZ42_013796	APZ42_013606	A0A162QFE9	A0A0N8CWW1	Uncharacterized protein.	TRK-fused protein.	0.683
APZ42_013796	APZ42_019396	A0A162QFE9	A0A0P5ZWL8	Uncharacterized protein.	Transport protein Sec31A.	0.979