(16 nodes) PAS domain network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_013603	Putative Neuronal PAS domain-containing protein. (957 aa)
	APZ42_014980	Putative Hypoxia inducible factor-1 alpha. (319 aa)
	APZ42_015653	Neuronal PAS domain-containing protein. (908 aa)
	APZ42_015893	Putative Gce. (555 aa)
	APZ42_020564	Single-minded 1-A. (897 aa)
	APZ42_016957	PAS domain-containing protein. (206 aa)
	APZ42_016264	Uncharacterized protein. (267 aa)
	APZ42_016247	Uncharacterized protein. (789 aa)
	DmagArnt2	Aryl hydrocarbone receptor nuclear translocator. (668 aa)
	APZ42_028786	Neuronal PAS domain-containing protein. (604 aa)
	APZ42_023431	Putative Potassium voltage-gated channel protein eag. (133 aa)
	APZ42_029890	Period circadian protein. (1288 aa)
	APZ42_031138	Uncharacterized protein. (315 aa)
	APZ42_033598	Aryl hydrocarbon receptor nuclear translocator protein 1. (946 aa)
	APZ42_002361	PAS domain-containing protein. (153 aa)
	APZ42_011221	cAMP-specific 3',5'-cyclic phosphodiesterase 7B; Belongs to the cyclic nucleotide phosphodiesterase family. (995 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_013603	APZ42_015653	A0A162QN70	A0A162NSW5	Putative Neuronal PAS domain-containing protein.	Neuronal PAS domain-containing protein.	0.834
APZ42_013603	APZ42_015893	A0A162QN70	A0A0N8CH51	Putative Neuronal PAS domain-containing protein.	Putative Gce.	0.834
APZ42_013603	APZ42_020564	A0A162QN70	A0A164X704	Putative Neuronal PAS domain-containing protein.	Single-minded 1-A.	0.434
APZ42_013603	APZ42_028786	A0A162QN70	A0A164QEC6	Putative Neuronal PAS domain-containing protein.	Neuronal PAS domain-containing protein.	0.834
APZ42_013603	APZ42_031138	A0A162QN70	A0A164N356	Putative Neuronal PAS domain-containing protein.	Uncharacterized protein.	0.834
APZ42_013603	APZ42_033598	A0A162QN70	A0A164KXJ8	Putative Neuronal PAS domain-containing protein.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.942
APZ42_013603	DmagArnt2	A0A162QN70	Q1JUI4	Putative Neuronal PAS domain-containing protein.	Aryl hydrocarbone receptor nuclear translocator.	0.999
APZ42_014980	APZ42_015653	A0A162P319	A0A162NSW5	Putative Hypoxia inducible factor-1 alpha.	Neuronal PAS domain-containing protein.	0.730
APZ42_014980	APZ42_015893	A0A162P319	A0A0N8CH51	Putative Hypoxia inducible factor-1 alpha.	Putative Gce.	0.730
APZ42_014980	APZ42_028786	A0A162P319	A0A164QEC6	Putative Hypoxia inducible factor-1 alpha.	Neuronal PAS domain-containing protein.	0.730
APZ42_014980	APZ42_031138	A0A162P319	A0A164N356	Putative Hypoxia inducible factor-1 alpha.	Uncharacterized protein.	0.730
APZ42_014980	APZ42_033598	A0A162P319	A0A164KXJ8	Putative Hypoxia inducible factor-1 alpha.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.741
APZ42_014980	DmagArnt2	A0A162P319	Q1JUI4	Putative Hypoxia inducible factor-1 alpha.	Aryl hydrocarbone receptor nuclear translocator.	0.981
APZ42_015653	APZ42_013603	A0A162NSW5	A0A162QN70	Neuronal PAS domain-containing protein.	Putative Neuronal PAS domain-containing protein.	0.834
APZ42_015653	APZ42_014980	A0A162NSW5	A0A162P319	Neuronal PAS domain-containing protein.	Putative Hypoxia inducible factor-1 alpha.	0.730
APZ42_015653	APZ42_016247	A0A162NSW5	A0A165AIT9	Neuronal PAS domain-containing protein.	Uncharacterized protein.	0.730
APZ42_015653	APZ42_016264	A0A162NSW5	A0A165AIK7	Neuronal PAS domain-containing protein.	Uncharacterized protein.	0.767
APZ42_015653	APZ42_020564	A0A162NSW5	A0A164X704	Neuronal PAS domain-containing protein.	Single-minded 1-A.	0.606
APZ42_015653	APZ42_029890	A0A162NSW5	A0A164P844	Neuronal PAS domain-containing protein.	Period circadian protein.	0.966
APZ42_015653	APZ42_033598	A0A162NSW5	A0A164KXJ8	Neuronal PAS domain-containing protein.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.985