STRINGSTRING
APZ42_031328 APZ42_031328 APZ42_031015 APZ42_031015 APZ42_019291 APZ42_019291 APZ42_022678 APZ42_022678 APZ42_025988 APZ42_025988 APZ42_013664 APZ42_013664 APZ42_028288 APZ42_028288 APZ42_021632 APZ42_021632 APZ42_020742 APZ42_020742 APZ42_024426 APZ42_024426 APZ42_026705 APZ42_026705 APZ42_030617 APZ42_030617 APZ42_018104 APZ42_018104 APZ42_032652 APZ42_032652 APZ42_028676 APZ42_028676 APZ42_028690 APZ42_028690 APZ42_016659 APZ42_016659 APZ42_023324 APZ42_023324 APZ42_026037 APZ42_026037 APZ42_017853 APZ42_017853 APZ42_019854 APZ42_019854 APZ42_029110 APZ42_029110 APZ42_024804 APZ42_024804 APZ42_020879 APZ42_020879 APZ42_027422 APZ42_027422 EOG090X0770 EOG090X0770 APZ42_012800 APZ42_012800 APZ42_029158 APZ42_029158 APZ42_018206 APZ42_018206 APZ42_018205 APZ42_018205 APZ42_015390 APZ42_015390 APZ42_020792 APZ42_020792 APZ42_016660 APZ42_016660 APZ42_025066 APZ42_025066 APZ42_033253 APZ42_033253 APZ42_024799 APZ42_024799 EOG090X0F8Z EOG090X0F8Z APZ42_029134 APZ42_029134 APZ42_021634 APZ42_021634 APZ42_017654 APZ42_017654 APZ42_022861 APZ42_022861 APZ42_021341 APZ42_021341 APZ42_020916 APZ42_020916 APZ42_019122 APZ42_019122 APZ42_026850 APZ42_026850 APZ42_031615 APZ42_031615 APZ42_015740 APZ42_015740 APZ42_016009 APZ42_016009 APZ42_015620 APZ42_015620 APZ42_015552 APZ42_015552 APZ42_015266 APZ42_015266 APZ42_015302 APZ42_015302 APZ42_014755 APZ42_014755 APZ42_014609 APZ42_014609 APZ42_014604 APZ42_014604 APZ42_014595 APZ42_014595 EOG090X01UY EOG090X01UY APZ42_012464 APZ42_012464 APZ42_012178 APZ42_012178 APZ42_011461 APZ42_011461 APZ42_011581 APZ42_011581 APZ42_011797 APZ42_011797 APZ42_010865 APZ42_010865 APZ42_002072 APZ42_002072 APZ42_001879 APZ42_001879 APZ42_000020 APZ42_000020 APZ42_033833 APZ42_033833 APZ42_033876 APZ42_033876 APZ42_033252 APZ42_033252 APZ42_032562 APZ42_032562 APZ42_032414 APZ42_032414 APZ42_032323 APZ42_032323 APZ42_031962 APZ42_031962 APZ42_031750 APZ42_031750 APZ42_031594 APZ42_031594 APZ42_030689 APZ42_030689 APZ42_030679 APZ42_030679 APZ42_030410 APZ42_030410 APZ42_030070 APZ42_030070 APZ42_029664 APZ42_029664 APZ42_029281 APZ42_029281 APZ42_028962 APZ42_028962 APZ42_028504 APZ42_028504 APZ42_028252 APZ42_028252 APZ42_027885 APZ42_027885 APZ42_027569 APZ42_027569 APZ42_027197 APZ42_027197 APZ42_027091 APZ42_027091 APZ42_026665 APZ42_026665 APZ42_026543 APZ42_026543 APZ42_026487 APZ42_026487 APZ42_026363 APZ42_026363 APZ42_026150 APZ42_026150 APZ42_025852 APZ42_025852 APZ42_024492 APZ42_024492 APZ42_023771 APZ42_023771 APZ42_024009 APZ42_024009 APZ42_024063 APZ42_024063 APZ42_024163 APZ42_024163 APZ42_023510 APZ42_023510 APZ42_023057 APZ42_023057 EOG090X04VI EOG090X04VI APZ42_022865 APZ42_022865 APZ42_022236 APZ42_022236 APZ42_021683 APZ42_021683 APZ42_021626 APZ42_021626 APZ42_021549 APZ42_021549 APZ42_021257 APZ42_021257 APZ42_020973 APZ42_020973 APZ42_020913 APZ42_020913 APZ42_020514 APZ42_020514 APZ42_020620 APZ42_020620 APZ42_020461 APZ42_020461 APZ42_020053 APZ42_020053 APZ42_020215 APZ42_020215 APZ42_020217 APZ42_020217 APZ42_019571 APZ42_019571 APZ42_019148 APZ42_019148 APZ42_018713 APZ42_018713 APZ42_018343 APZ42_018343 APZ42_016910 APZ42_016910 APZ42_016991 APZ42_016991 APZ42_016352 APZ42_016352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_031328tRNA selenocysteine 1-associated protein 1. (336 aa)
APZ42_031015Sex-lethal protein variant 2. (297 aa)
APZ42_019291HIV Tat-specific factor 1 protein. (460 aa)
APZ42_022678Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (293 aa)
APZ42_025988Poly-binding-splicing factor half pint. (614 aa)
APZ42_013664Putative Serine/arginine-rich splicing factor 2. (235 aa)
APZ42_028288CUGBP Elav family member. (532 aa)
APZ42_021632Cleavage and polyadenylation specificity factor subunit 7. (588 aa)
APZ42_020742Uncharacterized protein. (1016 aa)
APZ42_024426Putative Myelin expression factor 2. (629 aa)
APZ42_026705Heterogeneous nuclear ribonucleoprotein Q. (684 aa)
APZ42_030617CCR4-NOT transcription complex subunit. (1010 aa)
APZ42_018104Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (305 aa)
APZ42_032652Pre-mRNA branch site p14 protein. (122 aa)
APZ42_028676RNA-binding with serine-rich domain-like protein. (325 aa)
APZ42_028690THO complex subunit 4-A. (246 aa)
APZ42_016659U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (491 aa)
APZ42_023324Putative U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (446 aa)
APZ42_026037Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (313 aa)
APZ42_017853Putative Histone-lysine N-methyltransferase SETD1. (1194 aa)
APZ42_019854Squamous cell carcinoma antigen recognized by T-cells. (863 aa)
APZ42_029110Alkylated DNA repair protein alkB 8. (591 aa)
APZ42_024804Putative Serine/arginine-rich splicing factor 4. (363 aa)
APZ42_020879Splicing factor 3B subunit 4. (299 aa)
APZ42_027422Lupus La protein. (577 aa)
EOG090X0770Pre-mRNA-splicing factor RBM22. (414 aa)
APZ42_012800Polymerase delta-interacting protein. (388 aa)
APZ42_029158RNA-binding protein. (429 aa)
APZ42_018206MATH and LRR domain-containing protein. (280 aa)
APZ42_018205Carbonic anhydrase 5B, mitochondrial; Belongs to the alpha-carbonic anhydrase family. (490 aa)
APZ42_015390Putative MKI67 FHA domain-interacting nucleolar phosphoprotein. (403 aa)
APZ42_020792RNA-binding protein 10. (820 aa)
APZ42_016660RNA-binding protein. (578 aa)
APZ42_025066Heterogeneous nuclear ribonucleoprotein F. (924 aa)
APZ42_033253Putative SAFB transcription modulator. (950 aa)
APZ42_024799SRA stem-loop-interacting RNA-binding protein, mitochondrial. (386 aa)
EOG090X0F8ZNegative elongation factor E. (290 aa)
APZ42_029134SRA stem-loop-interacting RNA-binding protein, mitochondrial. (340 aa)
APZ42_021634Serine/arginine-rich splicing factor. (162 aa)
APZ42_017654Putative Ecto-NOX disulfide-thiol exchanger 1. (688 aa)
APZ42_022861Second mitotic wave missing. (993 aa)
APZ42_021341Putative Nucleolysin TIAR. (82 aa)
APZ42_020916Putative RNA-binding protein 39. (573 aa)
APZ42_019122Putative Nucleolysin TIAR. (56 aa)
APZ42_026850Cleavage stimulation factor 64 kDa subunit. (403 aa)
APZ42_031615Limkain-B1. (1035 aa)
APZ42_015740Putative RNA-binding protein 2. (227 aa)
APZ42_016009RNA-binding protein 40. (431 aa)
APZ42_015620Poly(A) RNA polymerase, mitochondrial. (726 aa)
APZ42_015552Putative APOBEC1 complementation factor. (564 aa)
APZ42_015266RNA-binding protein orb2. (193 aa)
APZ42_015302RNA-binding EWS-like protein. (491 aa)
APZ42_014755Putative Splicing factor U2af 38 kDa subunit. (327 aa)
APZ42_014609Nucleolysin TIAR. (247 aa)
APZ42_014604RRM domain-containing protein. (611 aa)
APZ42_014595Sodium/hydrogen exchanger; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (1011 aa)
EOG090X01UYEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (701 aa)
APZ42_012464Putative RNA-binding protein 38; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1283 aa)
APZ42_012178Cleavage stimulation factor 64 kDa subunit. (81 aa)
APZ42_011461Uncharacterized protein. (835 aa)
APZ42_011581Polyadenylate-binding protein 2. (222 aa)
APZ42_011797Putative DAZ-associated protein 1. (461 aa)
APZ42_010865Insulin growth factor 2 mRNA-binding 2-like protein. (593 aa)
APZ42_002072Lupus LA protein sjogren Syndrome type B antigen LA/SS-B. (374 aa)
APZ42_001879RRM domain-containing protein. (171 aa)
APZ42_000020Serine/arginine-rich splicing factor 1. (209 aa)
APZ42_033833Epithelial splicing regulatory protein. (566 aa)
APZ42_033876RNA-binding 15-like protein. (3533 aa)
APZ42_033252Putative Cytoplasmic polyadenylation element-binding protein 1. (622 aa)
APZ42_032562Putative APOBEC1 complementation factor. (528 aa)
APZ42_032414Heterogeneous nuclear ribonucleoprotein L. (406 aa)
APZ42_032323RRM domain-containing protein. (478 aa)
APZ42_031962Uncharacterized protein. (232 aa)
APZ42_031750Putative RNA-binding protein with multiple splicing 2. (255 aa)
APZ42_031594RRM domain-containing protein. (687 aa)
APZ42_030689Putative Activator of basal transcription 1. (228 aa)
APZ42_030679RRM domain-containing protein. (231 aa)
APZ42_030410Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (509 aa)
APZ42_030070RNA-binding protein 45. (508 aa)
APZ42_029664Putative RNA binding protein fox-1 2. (316 aa)
APZ42_029281Transformer-2-like protein. (259 aa)
APZ42_028962Splicing factor 45. (381 aa)
APZ42_028504Insulin growth factor 2 mRNA-binding 3-A-like protein. (179 aa)
APZ42_028252ELAV protein 2. (426 aa)
APZ42_027885Putative Serine/arginine-rich splicing factor 3. (233 aa)
APZ42_027569Bruno-3. (390 aa)
APZ42_027197LA-related protein 7. (514 aa)
APZ42_027091Polypyrimidine tract-binding protein 2. (214 aa)
APZ42_026665Putative Splicing factor. (546 aa)
APZ42_026543Peroxisome proliferator-activated receptor gamma coactivator-related-like protein. (511 aa)
APZ42_026487Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (621 aa)
APZ42_026363Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (194 aa)
APZ42_026150CUGBP ELAV family member 4. (80 aa)
APZ42_025852Protein SCAF8-like. (1300 aa)
APZ42_024492U2 snRNP-associated SURP motif-containing protein. (897 aa)
APZ42_023771Protein boule-like protein. (234 aa)
APZ42_024009Putative Transcription initiation factor TFIID subunit 2. (1846 aa)
APZ42_024063Putative TAR DNA-binding protein 43. (632 aa)
APZ42_024163RNA binding protein fox-1 2. (229 aa)
APZ42_023510RRM domain-containing protein. (304 aa)
APZ42_023057Polypyrimidine tract-binding protein 2. (251 aa)
EOG090X04VIEOG090X04VI. (767 aa)
APZ42_022865Putative Bruno-3. (377 aa)
APZ42_022236Sans fille-like protein. (226 aa)
APZ42_021683Putative RNA-binding protein 1. (164 aa)
APZ42_021626CUGBP ELAV family member 2. (81 aa)
APZ42_021549CUGBP ELAV family member 4. (167 aa)
APZ42_021257Uncharacterized protein. (376 aa)
APZ42_020973Putative RNA-binding motif, single-stranded-interacting protein 3. (458 aa)
APZ42_020913Ras GTPase-activating protein-binding protein. (578 aa)
APZ42_020514Synaptojanin-1. (432 aa)
APZ42_020620Putative RNA-binding protein 38. (182 aa)
APZ42_020461Putative Ribonucleoprotein PTB-binding 2. (824 aa)
APZ42_020053Putative RNA-binding protein squid. (463 aa)
APZ42_020215Putative Eukaryotic translation initiation factor 4B. (658 aa)
APZ42_020217Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (151 aa)
APZ42_019571Putative RNA-binding protein 19. (849 aa)
APZ42_019148Putative Hrp65 protein. (554 aa)
APZ42_018713DnaJ subfamily C member 17. (291 aa)
APZ42_018343Putative Heterogeneous nuclear ribonucleoprotein H. (342 aa)
APZ42_016910RRM domain-containing protein. (1633 aa)
APZ42_016991Uncharacterized protein. (1406 aa)
APZ42_016352Putative Apoptotic chromatin condensation inducer in the nucleus. (1227 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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