(6 nodes) BIR repeat network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_022927	Baculoviral IAP repeat-containing protein 6. (4631 aa)
	APZ42_020051	Death-associated inhibitor of apoptosis 1. (405 aa)
	APZ42_024118	Baculoviral IAP repeat-containing protein 5.2. (160 aa)
	APZ42_031824	Uncharacterized protein. (546 aa)
	APZ42_012138	Baculoviral IAP repeat-containing protein 8. (505 aa)
	APZ42_030598	Uncharacterized protein. (133 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_012138	APZ42_022927	A0A162S4Z3	A0A164VB86	Baculoviral IAP repeat-containing protein 8.	Baculoviral IAP repeat-containing protein 6.	0.718
APZ42_012138	APZ42_024118	A0A162S4Z3	A0A0P6HRK7	Baculoviral IAP repeat-containing protein 8.	Baculoviral IAP repeat-containing protein 5.2.	0.825
APZ42_020051	APZ42_022927	A0A164XYG1	A0A164VB86	Death-associated inhibitor of apoptosis 1.	Baculoviral IAP repeat-containing protein 6.	0.718
APZ42_020051	APZ42_024118	A0A164XYG1	A0A0P6HRK7	Death-associated inhibitor of apoptosis 1.	Baculoviral IAP repeat-containing protein 5.2.	0.825
APZ42_022927	APZ42_012138	A0A164VB86	A0A162S4Z3	Baculoviral IAP repeat-containing protein 6.	Baculoviral IAP repeat-containing protein 8.	0.718
APZ42_022927	APZ42_020051	A0A164VB86	A0A164XYG1	Baculoviral IAP repeat-containing protein 6.	Death-associated inhibitor of apoptosis 1.	0.718
APZ42_022927	APZ42_024118	A0A164VB86	A0A0P6HRK7	Baculoviral IAP repeat-containing protein 6.	Baculoviral IAP repeat-containing protein 5.2.	0.825
APZ42_022927	APZ42_030598	A0A164VB86	A0A164NLK7	Baculoviral IAP repeat-containing protein 6.	Uncharacterized protein.	0.672
APZ42_022927	APZ42_031824	A0A164VB86	A0A162DAP0	Baculoviral IAP repeat-containing protein 6.	Uncharacterized protein.	0.672
APZ42_024118	APZ42_012138	A0A0P6HRK7	A0A162S4Z3	Baculoviral IAP repeat-containing protein 5.2.	Baculoviral IAP repeat-containing protein 8.	0.825
APZ42_024118	APZ42_020051	A0A0P6HRK7	A0A164XYG1	Baculoviral IAP repeat-containing protein 5.2.	Death-associated inhibitor of apoptosis 1.	0.825
APZ42_024118	APZ42_022927	A0A0P6HRK7	A0A164VB86	Baculoviral IAP repeat-containing protein 5.2.	Baculoviral IAP repeat-containing protein 6.	0.825
APZ42_030598	APZ42_022927	A0A164NLK7	A0A164VB86	Uncharacterized protein.	Baculoviral IAP repeat-containing protein 6.	0.672
APZ42_031824	APZ42_022927	A0A162DAP0	A0A164VB86	Uncharacterized protein.	Baculoviral IAP repeat-containing protein 6.	0.672