(77 nodes) Small GTP-binding protein domain network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_029260	Ras-related protein Rab-34. (272 aa)
	APZ42_020460	Rab21. (213 aa)
	APZ42_020749	ADP-ribosylation factor 5-like protein; Belongs to the small GTPase superfamily. Arf family. (179 aa)
	APZ42_020932	GTPase Era, mitochondrial. (410 aa)
	APZ42_022693	Ras-related protein Rab-30. (202 aa)
	APZ42_022417	Putative Ras family protein member 12. (798 aa)
	APZ42_023261	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (192 aa)
	APZ42_024308	Ras-related protein Rab-40C. (335 aa)
	APZ42_024220	ADP ribosylation factor 6-like protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	APZ42_024197	Ras-related protein Rab-5C. (227 aa)
	APZ42_023976	ADP-ribosylation factor-related protein 1. (168 aa)
	APZ42_023902	Developmentally-regulated GTP-binding protein 2. (364 aa)
	APZ42_024503	Ras-related C3 botulinum toxin substrate. (195 aa)
	APZ42_024781	Ras-related protein Rab-14. (215 aa)
	APZ42_025691	Uncharacterized protein. (238 aa)
	APZ42_025812	RabX6. (242 aa)
	APZ42_026502	GTP-binding protein Rheb. (185 aa)
	APZ42_026737	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (683 aa)
	APZ42_029101	RabX6. (208 aa)
	APZ42_029154	Translation initiation factor IF-2. (742 aa)
	APZ42_029560	Rac GTP-binding protein ARAC9. (191 aa)
	APZ42_029544	Ras family protein member 10B. (330 aa)
	APZ42_030282	Uncharacterized protein. (196 aa)
	APZ42_031373	Eukaryotic translation initiation factor 5B. (644 aa)
	APZ42_031614	Tr-type G domain-containing protein. (1028 aa)
	APZ42_032060	Developmentally-regulated GTP-binding protein 1. (1411 aa)
	APZ42_032830	Elongation factor G, mitochondrial. (770 aa)
	APZ42_033099	ADP-ribosylation factor protein 4C; Belongs to the small GTPase superfamily. Arf family. (210 aa)
	APZ42_033085	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (748 aa)
	APZ42_033676	GTP-binding protein Di-Ras2. (212 aa)
	APZ42_034410	Rho family small gtp binding protein cdc42. (214 aa)
	APZ42_034347	Ras-related protein Rap-2C. (181 aa)
	APZ42_002873	tRNA pseudouridine synthase B. (141 aa)
	APZ42_011511	Ras-related protein Rab-2. (212 aa)
	APZ42_011381	Ras-related protein Rab-32. (617 aa)
	APZ42_013174	Ras-related protein Rab-10. (201 aa)
	APZ42_015191	Rho-related BTB domain-containing protein 2. (718 aa)
	APZ42_015118	Ras-related protein Rab-39B. (205 aa)
	APZ42_027207	Rab protein. (190 aa)
	APZ42_012229	Ras-related protein Rab-11A. (215 aa)
	APZ42_019139	Putative GTP-binding protein. (274 aa)
	APZ42_015159	Ras-related protein Rab-19. (217 aa)
	APZ42_020697	116 kDa U5 small nuclear ribonucleoprotein component protein. (844 aa)
	APZ42_021404	Putative Serine/threonine-protein kinase OSR1. (393 aa)
	EOG090X0DLH	ADP-ribosylation factor protein 8B-A; Belongs to the small GTPase superfamily. Arf family. (187 aa)
	EOG090X00RJ	116 kDa U5 small nuclear ribonucleoprotein component protein. (982 aa)
	APZ42_014248	Ras-related protein Rab-35. (201 aa)
	APZ42_021841	Ras-related protein Rab-7a. (208 aa)
	APZ42_024200	Ras-related protein R-Ras2. (203 aa)
	APZ42_018132	Ras protein 1. (190 aa)
	APZ42_034485	ADP-ribosylation factor protein 13B. (366 aa)
	APZ42_020261	tRNA modification GTPase GTPBP3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (505 aa)
	APZ42_033294	Putative Ras-related protein RabJ. (218 aa)
	APZ42_023881	ADP-ribosylation factor protein 6; Belongs to the small GTPase superfamily. Arf family. (191 aa)
	APZ42_031203	Ras-related protein Rab-18-B. (207 aa)
	APZ42_029558	ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	APZ42_012420	Ras-related protein Rab-8A. (211 aa)
	APZ42_012615	Rho-related GTP-binding protein RhoF. (223 aa)
	APZ42_016674	Ras-related protein Rab-26. (288 aa)
	APZ42_018359	Putative Rho-related GTP-binding protein RhoU. (308 aa)
	APZ42_011302	Ras-related protein Rab-23. (251 aa)
	APZ42_026236	Ras-related C3 botulinum toxin substrate. (192 aa)
	APZ42_014495	Ras GTP-binding protein RhoL. (184 aa)
	APZ42_011697	NF-kappa-B inhibitor-interacting Ras protein 2. (192 aa)
	APZ42_013681	ADP-ribosylation factor protein 3; Belongs to the small GTPase superfamily. Arf family. (180 aa)
	APZ42_014491	Ras GTP-binding protein RhoL. (187 aa)
	APZ42_031267	Ras family protein member 12. (278 aa)
	APZ42_017265	Ras-related protein Rab-6A. (208 aa)
	APZ42_029903	Ras-related protein Rab-27A. (223 aa)
	APZ42_020174	Putative Membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase. (633 aa)
	APZ42_034547	ADP ribosylation factor protein; Belongs to the small GTPase superfamily. Arf family. (179 aa)
	APZ42_020965	Ras-related protein Rab-1A. (203 aa)
	APZ42_016930	Dexamethasone-induced Ras-related protein 1. (115 aa)
	APZ42_014067	Selenocysteine-specific elongation factor. (536 aa)
	APZ42_011304	EF-hand calcium-binding domain-containing protein 4A. (806 aa)
	APZ42_030967	Ras-related protein Rab-3A. (219 aa)
	APZ42_033303	ADP-ribosylation factor protein 2; Belongs to the small GTPase superfamily. Arf family. (184 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002873	APZ42_014067	A0A164HZF7	A0A0N8CHN2	tRNA pseudouridine synthase B.	Selenocysteine-specific elongation factor.	0.744
APZ42_002873	APZ42_020697	A0A164HZF7	A0A0P6GST7	tRNA pseudouridine synthase B.	116 kDa U5 small nuclear ribonucleoprotein component protein.	0.620
APZ42_002873	APZ42_020932	A0A164HZF7	A0A164X4F0	tRNA pseudouridine synthase B.	GTPase Era, mitochondrial.	0.481
APZ42_002873	APZ42_021404	A0A164HZF7	A0A0P6FKG6	tRNA pseudouridine synthase B.	Putative Serine/threonine-protein kinase OSR1.	0.472
APZ42_002873	APZ42_031614	A0A164HZF7	A0A164MR09	tRNA pseudouridine synthase B.	Tr-type G domain-containing protein.	0.620
APZ42_002873	APZ42_033085	A0A164HZF7	A0A164LD97	tRNA pseudouridine synthase B.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.620
APZ42_002873	EOG090X00RJ	A0A164HZF7	A0A0P6ACD0	tRNA pseudouridine synthase B.	116 kDa U5 small nuclear ribonucleoprotein component protein.	0.620
APZ42_011302	APZ42_011511	A0A0P5IT44	A0A162SRZ7	Ras-related protein Rab-23.	Ras-related protein Rab-2.	0.535
APZ42_011302	APZ42_013681	A0A0P5IT44	A0A0P4XMI5	Ras-related protein Rab-23.	ADP-ribosylation factor protein 3; Belongs to the small GTPase superfamily. Arf family.	0.638
APZ42_011302	APZ42_024781	A0A0P5IT44	A0A164TRN1	Ras-related protein Rab-23.	Ras-related protein Rab-14.	0.503
APZ42_011302	APZ42_029101	A0A0P5IT44	A0A164PXF9	Ras-related protein Rab-23.	RabX6.	0.490
APZ42_011302	APZ42_033303	A0A0P5IT44	A0A0N8AN29	Ras-related protein Rab-23.	ADP-ribosylation factor protein 2; Belongs to the small GTPase superfamily. Arf family.	0.549
APZ42_011304	APZ42_011511	A0A0N8CHD9	A0A162SRZ7	EF-hand calcium-binding domain-containing protein 4A.	Ras-related protein Rab-2.	0.626
APZ42_011304	APZ42_012229	A0A0N8CHD9	A0A162CY40	EF-hand calcium-binding domain-containing protein 4A.	Ras-related protein Rab-11A.	0.652
APZ42_011304	APZ42_012420	A0A0N8CHD9	A0A0P5R8P7	EF-hand calcium-binding domain-containing protein 4A.	Ras-related protein Rab-8A.	0.717
APZ42_011304	APZ42_012615	A0A0N8CHD9	A0A0P5KP21	EF-hand calcium-binding domain-containing protein 4A.	Rho-related GTP-binding protein RhoF.	0.495
APZ42_011304	APZ42_013174	A0A0N8CHD9	A0A162R329	EF-hand calcium-binding domain-containing protein 4A.	Ras-related protein Rab-10.	0.716
APZ42_011304	APZ42_013681	A0A0N8CHD9	A0A0P4XMI5	EF-hand calcium-binding domain-containing protein 4A.	ADP-ribosylation factor protein 3; Belongs to the small GTPase superfamily. Arf family.	0.515
APZ42_011304	APZ42_014248	A0A0N8CHD9	A0A0P5ZIH4	EF-hand calcium-binding domain-containing protein 4A.	Ras-related protein Rab-35.	0.413
APZ42_011304	APZ42_014491	A0A0N8CHD9	A0A0P4XH59	EF-hand calcium-binding domain-containing protein 4A.	Ras GTP-binding protein RhoL.	0.511