(11 nodes) Leucine-rich repeat, cysteine-containing subtype network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_016769	S-phase kinase-associated protein. (424 aa)
	APZ42_024579	F-box/LRR-repeat protein. (571 aa)
	EOG090X05GA	F-box/LRR-repeat protein 14. (429 aa)
	APZ42_011883	F-box/LRR-repeat protein 20. (431 aa)
	APZ42_030485	Jmjc domain-containing histone demethylation protein. (516 aa)
	APZ42_031342	Putative F-box/LRR-repeat protein 7. (631 aa)
	APZ42_030815	F-box/LRR-repeat protein. (260 aa)
	APZ42_015750	Jmjc domain-containing histone demethylation protein. (502 aa)
	APZ42_018799	F-box/LRR-repeat protein. (631 aa)
	APZ42_020464	Uncharacterized protein. (517 aa)
	APZ42_014985	Putative F-box/LRR-repeat protein 2. (577 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_011883	APZ42_016769	A0A0P5ZA17	A0A165A4X0	F-box/LRR-repeat protein 20.	S-phase kinase-associated protein.	0.548
APZ42_014985	APZ42_016769	A0A162P2Q8	A0A165A4X0	Putative F-box/LRR-repeat protein 2.	S-phase kinase-associated protein.	0.510
APZ42_015750	APZ42_016769	A0A0N8DSC2	A0A165A4X0	Jmjc domain-containing histone demethylation protein.	S-phase kinase-associated protein.	0.510
APZ42_016769	APZ42_011883	A0A165A4X0	A0A0P5ZA17	S-phase kinase-associated protein.	F-box/LRR-repeat protein 20.	0.548
APZ42_016769	APZ42_014985	A0A165A4X0	A0A162P2Q8	S-phase kinase-associated protein.	Putative F-box/LRR-repeat protein 2.	0.510
APZ42_016769	APZ42_015750	A0A165A4X0	A0A0N8DSC2	S-phase kinase-associated protein.	Jmjc domain-containing histone demethylation protein.	0.510
APZ42_016769	APZ42_018799	A0A165A4X0	A0A0N8AR27	S-phase kinase-associated protein.	F-box/LRR-repeat protein.	0.549
APZ42_016769	APZ42_030485	A0A165A4X0	A0A0P5WDG6	S-phase kinase-associated protein.	Jmjc domain-containing histone demethylation protein.	0.510
APZ42_016769	APZ42_030815	A0A165A4X0	A0A0P5SUJ9	S-phase kinase-associated protein.	F-box/LRR-repeat protein.	0.510
APZ42_016769	APZ42_031342	A0A165A4X0	A0A0P5T7K9	S-phase kinase-associated protein.	Putative F-box/LRR-repeat protein 7.	0.549
APZ42_016769	EOG090X05GA	A0A165A4X0	A0A0P6DJR4	S-phase kinase-associated protein.	F-box/LRR-repeat protein 14.	0.629
APZ42_018799	APZ42_016769	A0A0N8AR27	A0A165A4X0	F-box/LRR-repeat protein.	S-phase kinase-associated protein.	0.549
APZ42_024579	EOG090X05GA	A0A0P6GT10	A0A0P6DJR4	F-box/LRR-repeat protein.	F-box/LRR-repeat protein 14.	0.499
APZ42_030485	APZ42_016769	A0A0P5WDG6	A0A165A4X0	Jmjc domain-containing histone demethylation protein.	S-phase kinase-associated protein.	0.510
APZ42_030815	APZ42_016769	A0A0P5SUJ9	A0A165A4X0	F-box/LRR-repeat protein.	S-phase kinase-associated protein.	0.510
APZ42_031342	APZ42_016769	A0A0P5T7K9	A0A165A4X0	Putative F-box/LRR-repeat protein 7.	S-phase kinase-associated protein.	0.549
EOG090X05GA	APZ42_016769	A0A0P6DJR4	A0A165A4X0	F-box/LRR-repeat protein 14.	S-phase kinase-associated protein.	0.629
EOG090X05GA	APZ42_024579	A0A0P6DJR4	A0A0P6GT10	F-box/LRR-repeat protein 14.	F-box/LRR-repeat protein.	0.499