STRINGSTRING
APZ42_005551 APZ42_005551 APZ42_006121 APZ42_006121 APZ42_006167 APZ42_006167 APZ42_009925 APZ42_009925 APZ42_011260 APZ42_011260 APZ42_013561 APZ42_013561 APZ42_014347 APZ42_014347 APZ42_014606 APZ42_014606 APZ42_015656 APZ42_015656 APZ42_015909 APZ42_015909 APZ42_034483 APZ42_034483 APZ42_004607 APZ42_004607 APZ42_005184 APZ42_005184 APZ42_011712 APZ42_011712 APZ42_016566 APZ42_016566 APZ42_005183 APZ42_005183 APZ42_021862 APZ42_021862 APZ42_019142 APZ42_019142 APZ42_024175 APZ42_024175 APZ42_014504 APZ42_014504 APZ42_020290 APZ42_020290 EOG090X0HZC EOG090X0HZC APZ42_011079 APZ42_011079 EOG090X0LUS EOG090X0LUS APZ42_027379 APZ42_027379 APZ42_005185 APZ42_005185 APZ42_016450 APZ42_016450 APZ42_020766 APZ42_020766 APZ42_015392 APZ42_015392 APZ42_006120 APZ42_006120 APZ42_016641 APZ42_016641 APZ42_019925 APZ42_019925 APZ42_020280 APZ42_020280 APZ42_021147 APZ42_021147 APZ42_022990 APZ42_022990 APZ42_024128 APZ42_024128 APZ42_023986 APZ42_023986 APZ42_023930 APZ42_023930 APZ42_023936 APZ42_023936 APZ42_023928 APZ42_023928 APZ42_023889 APZ42_023889 APZ42_023887 APZ42_023887 APZ42_023888 APZ42_023888 APZ42_023810 APZ42_023810 APZ42_027007 APZ42_027007 APZ42_028144 APZ42_028144 APZ42_029135 APZ42_029135 APZ42_030168 APZ42_030168 APZ42_032157 APZ42_032157 APZ42_004083 APZ42_004083
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_005551Centromere protein X. (89 aa)
APZ42_006121Histone H2B; Belongs to the histone H2B family. (123 aa)
APZ42_006167Histone H2A; Belongs to the histone H2A family. (126 aa)
APZ42_009925Histone H2A; Belongs to the histone H2A family. (113 aa)
APZ42_011260Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (381 aa)
APZ42_013561TAF6 RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L-like protein. (534 aa)
APZ42_014347Putative Chromatin accessibility complex protein 1. (326 aa)
APZ42_014606STAGA complex 65 subunit gamma. (357 aa)
APZ42_015656Putative Transcription initiation factor TFIID subunit 3. (928 aa)
APZ42_015909Putative Transcription initiation protein SPT3. (154 aa)
APZ42_034483Histone domain-containing protein; Belongs to the histone H2B family. (455 aa)
APZ42_004607Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
APZ42_005184Histone H2B; Belongs to the histone H2B family. (123 aa)
APZ42_011712Histone H2B; Belongs to the histone H2B family. (129 aa)
APZ42_016566Putative Centromeric histone CENP-A. (148 aa)
APZ42_005183Histone H2A; Belongs to the histone H2A family. (126 aa)
APZ42_021862Putative DNA polymerase epsilon subunit 4. (128 aa)
APZ42_019142Histone H2A; Belongs to the histone H2A family. (141 aa)
APZ42_024175Histone H2B; Belongs to the histone H2B family. (123 aa)
APZ42_014504Transcription initiation factor TFIID subunit 9. (229 aa)
APZ42_020290Dr1-associated corepressor. (283 aa)
EOG090X0HZCTranscription initiation factor TFIID subunit 12. (136 aa)
APZ42_011079Histone H3 type. (189 aa)
EOG090X0LUSTata-binding protein-associated phosphoprotein dr1. (169 aa)
APZ42_027379Transcription initiation factor TFIID subunit 6. (601 aa)
APZ42_005185Histone H3; Belongs to the histone H3 family. (136 aa)
APZ42_016450Putative Transcription initiation factor TFIID subunit 4. (997 aa)
APZ42_020766Centromere protein S. (148 aa)
APZ42_015392Transcription initiation factor TFIID subunit 8. (292 aa)
APZ42_006120Histone H2B; Belongs to the histone H2B family. (123 aa)
APZ42_016641Putative histone H3.3. (150 aa)
APZ42_019925TATA box binding protein tbp-associated factor. (142 aa)
APZ42_020280SON of sevenless protein. (1537 aa)
APZ42_021147Putative Transcription initiation factor TFIID subunit 11. (261 aa)
APZ42_022990Chromatin accessibility complex 14kD protein. (209 aa)
APZ42_024128Histone H3.2. (170 aa)
APZ42_023986Histone H3.2. (154 aa)
APZ42_023930Histone H2B; Belongs to the histone H2B family. (145 aa)
APZ42_023936Histone H2A; Belongs to the histone H2A family. (72 aa)
APZ42_023928Histone H3; Belongs to the histone H3 family. (150 aa)
APZ42_023889Histone H3.3. (159 aa)
APZ42_023887Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (146 aa)
APZ42_023888Histone H2B; Belongs to the histone H2B family. (129 aa)
APZ42_023810Histone H3.2. (156 aa)
APZ42_027007Ankyrin repeat and BTB/POZ domain-containing protein. (654 aa)
APZ42_028144Histone H2A; Belongs to the histone H2A family. (164 aa)
APZ42_029135Histone H2A; Belongs to the histone H2A family. (132 aa)
APZ42_030168Putative DNA polymerase epsilon subunit 3. (141 aa)
APZ42_032157Chromatin accessibility complex protein 1. (110 aa)
APZ42_004083Histone H3.3. (108 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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