(7 nodes) PAS fold network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_015653	Neuronal PAS domain-containing protein. (908 aa)
	APZ42_016247	Uncharacterized protein. (789 aa)
	DmagArnt2	Aryl hydrocarbone receptor nuclear translocator. (668 aa)
	APZ42_033598	Aryl hydrocarbon receptor nuclear translocator protein 1. (946 aa)
	APZ42_031138	Uncharacterized protein. (315 aa)
	APZ42_029890	Period circadian protein. (1288 aa)
	APZ42_014980	Putative Hypoxia inducible factor-1 alpha. (319 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_014980	APZ42_015653	A0A162P319	A0A162NSW5	Putative Hypoxia inducible factor-1 alpha.	Neuronal PAS domain-containing protein.	0.730
APZ42_014980	APZ42_031138	A0A162P319	A0A164N356	Putative Hypoxia inducible factor-1 alpha.	Uncharacterized protein.	0.730
APZ42_014980	APZ42_033598	A0A162P319	A0A164KXJ8	Putative Hypoxia inducible factor-1 alpha.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.741
APZ42_014980	DmagArnt2	A0A162P319	Q1JUI4	Putative Hypoxia inducible factor-1 alpha.	Aryl hydrocarbone receptor nuclear translocator.	0.981
APZ42_015653	APZ42_014980	A0A162NSW5	A0A162P319	Neuronal PAS domain-containing protein.	Putative Hypoxia inducible factor-1 alpha.	0.730
APZ42_015653	APZ42_016247	A0A162NSW5	A0A165AIT9	Neuronal PAS domain-containing protein.	Uncharacterized protein.	0.730
APZ42_015653	APZ42_029890	A0A162NSW5	A0A164P844	Neuronal PAS domain-containing protein.	Period circadian protein.	0.966
APZ42_015653	APZ42_033598	A0A162NSW5	A0A164KXJ8	Neuronal PAS domain-containing protein.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.985
APZ42_016247	APZ42_015653	A0A165AIT9	A0A162NSW5	Uncharacterized protein.	Neuronal PAS domain-containing protein.	0.730
APZ42_016247	APZ42_031138	A0A165AIT9	A0A164N356	Uncharacterized protein.	Uncharacterized protein.	0.730
APZ42_016247	APZ42_033598	A0A165AIT9	A0A164KXJ8	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.730
APZ42_016247	DmagArnt2	A0A165AIT9	Q1JUI4	Uncharacterized protein.	Aryl hydrocarbone receptor nuclear translocator.	0.958
APZ42_029890	APZ42_015653	A0A164P844	A0A162NSW5	Period circadian protein.	Neuronal PAS domain-containing protein.	0.966
APZ42_029890	APZ42_031138	A0A164P844	A0A164N356	Period circadian protein.	Uncharacterized protein.	0.810
APZ42_029890	APZ42_033598	A0A164P844	A0A164KXJ8	Period circadian protein.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.972
APZ42_029890	DmagArnt2	A0A164P844	Q1JUI4	Period circadian protein.	Aryl hydrocarbone receptor nuclear translocator.	0.829
APZ42_031138	APZ42_014980	A0A164N356	A0A162P319	Uncharacterized protein.	Putative Hypoxia inducible factor-1 alpha.	0.730
APZ42_031138	APZ42_016247	A0A164N356	A0A165AIT9	Uncharacterized protein.	Uncharacterized protein.	0.730
APZ42_031138	APZ42_029890	A0A164N356	A0A164P844	Uncharacterized protein.	Period circadian protein.	0.810
APZ42_033598	APZ42_014980	A0A164KXJ8	A0A162P319	Aryl hydrocarbon receptor nuclear translocator protein 1.	Putative Hypoxia inducible factor-1 alpha.	0.741