(12 nodes) SANT domain network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_024151	DnaJ subfamily C member 2. (645 aa)
	APZ42_028349	REST corepressor 3. (474 aa)
	APZ42_021741	SWI/SNF complex subunit SMARCC1. (1090 aa)
	APZ42_019496	Transcriptional adapter 2-beta. (629 aa)
	APZ42_017885	Uncharacterized protein. (554 aa)
	APZ42_017698	Zinc finger PLAGL2-like protein. (1247 aa)
	APZ42_012182	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member. (1043 aa)
	APZ42_022422	C2H2-type domain-containing protein. (588 aa)
	APZ42_032694	Uncharacterized protein. (865 aa)
	APZ42_019853	Nuclear receptor corepressor. (2125 aa)
	APZ42_028242	Putative Metastasis-associated protein MTA1. (872 aa)
	APZ42_016587	Transcriptional adapter. (387 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_012182	APZ42_019853	A0A0P4Y4S5	A0A0P6A9W1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member.	Nuclear receptor corepressor.	0.436
APZ42_012182	APZ42_021741	A0A0P4Y4S5	A0A164WHX5	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member.	SWI/SNF complex subunit SMARCC1.	0.793
APZ42_012182	APZ42_028242	A0A0P4Y4S5	A0A0P5UUK1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member.	Putative Metastasis-associated protein MTA1.	0.670
APZ42_012182	APZ42_028349	A0A0P4Y4S5	A0A0N8ATZ6	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member.	REST corepressor 3.	0.663
APZ42_012182	APZ42_032694	A0A0P4Y4S5	A0A164LSX9	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member.	Uncharacterized protein.	0.763
APZ42_016587	APZ42_019853	A0A0N7ZJ05	A0A0P6A9W1	Transcriptional adapter.	Nuclear receptor corepressor.	0.937
APZ42_016587	APZ42_024151	A0A0N7ZJ05	A0A0P5ZAW4	Transcriptional adapter.	DnaJ subfamily C member 2.	0.566
APZ42_017698	APZ42_017885	A0A164ZNB4	A0A164ZED2	Zinc finger PLAGL2-like protein.	Uncharacterized protein.	0.402
APZ42_017698	APZ42_022422	A0A164ZNB4	A0A164VI55	Zinc finger PLAGL2-like protein.	C2H2-type domain-containing protein.	0.533
APZ42_017698	APZ42_028349	A0A164ZNB4	A0A0N8ATZ6	Zinc finger PLAGL2-like protein.	REST corepressor 3.	0.541
APZ42_017885	APZ42_017698	A0A164ZED2	A0A164ZNB4	Uncharacterized protein.	Zinc finger PLAGL2-like protein.	0.402
APZ42_019496	APZ42_019853	A0A164Y7X0	A0A0P6A9W1	Transcriptional adapter 2-beta.	Nuclear receptor corepressor.	0.937
APZ42_019496	APZ42_024151	A0A164Y7X0	A0A0P5ZAW4	Transcriptional adapter 2-beta.	DnaJ subfamily C member 2.	0.566
APZ42_019853	APZ42_012182	A0A0P6A9W1	A0A0P4Y4S5	Nuclear receptor corepressor.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member.	0.436
APZ42_019853	APZ42_016587	A0A0P6A9W1	A0A0N7ZJ05	Nuclear receptor corepressor.	Transcriptional adapter.	0.937
APZ42_019853	APZ42_019496	A0A0P6A9W1	A0A164Y7X0	Nuclear receptor corepressor.	Transcriptional adapter 2-beta.	0.937
APZ42_019853	APZ42_028349	A0A0P6A9W1	A0A0N8ATZ6	Nuclear receptor corepressor.	REST corepressor 3.	0.512
APZ42_021741	APZ42_012182	A0A164WHX5	A0A0P4Y4S5	SWI/SNF complex subunit SMARCC1.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member.	0.793
APZ42_022422	APZ42_017698	A0A164VI55	A0A164ZNB4	C2H2-type domain-containing protein.	Zinc finger PLAGL2-like protein.	0.533
APZ42_024151	APZ42_016587	A0A0P5ZAW4	A0A0N7ZJ05	DnaJ subfamily C member 2.	Transcriptional adapter.	0.566