STRINGSTRING
APZ42_031704 APZ42_031704 APZ42_016099 APZ42_016099 APZ42_015169 APZ42_015169 APZ42_000407 APZ42_000407 APZ42_011609 APZ42_011609 APZ42_002399 APZ42_002399 APZ42_021443 APZ42_021443 APZ42_025210 APZ42_025210 APZ42_013654 APZ42_013654
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42_031704AP-3 complex subunit sigma-2. (189 aa)
APZ42_016099AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
APZ42_015169AP-4 complex subunit sigma-1/sw-like protein. (142 aa)
APZ42_000407AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (268 aa)
APZ42_011609Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (515 aa)
APZ42_002399AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (349 aa)
APZ42_021443AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (415 aa)
APZ42_025210Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (141 aa)
APZ42_013654AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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