(49 nodes) Helix-loop-helix DNA-binding domain superfamily network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_016446	BHLH domain-containing protein. (165 aa)
	APZ42_015912	Retrovirus-related Pol Polyprotein from type-1 retrotransposable element R1. (206 aa)
	EOG090X0511	Putative Neurogenin-3. (297 aa)
	DmagArnt2	Aryl hydrocarbone receptor nuclear translocator. (668 aa)
	APZ42_017607	Carbohydrate-responsive element-binding. (1023 aa)
	APZ42_023690	Heart-and neural crest derivatives-expressed protein. (289 aa)
	APZ42_030972	Helix-loop-helix protein. (201 aa)
	APZ42_015063	Basic helix-loop-helix transcription factor amos. (267 aa)
	APZ42_015084	THAP domain-containing protein 3. (2123 aa)
	APZ42_012996	Transcription factor podocyte-expressed 1 pod-1 epicardin capsulin. (211 aa)
	APZ42_027591	Extra macrochaetae-like protein. (113 aa)
	APZ42_020665	Hairy/enhancer-of-split related with YRPW motif protein. (350 aa)
	APZ42_014312	Basic helix-loop-helix neural transcription factor TAP. (288 aa)
	APZ42_015397	Putative Neurogenic differentiation factor 4. (477 aa)
	APZ42_016781	Putative Helix-loop-helix protein 1. (255 aa)
	APZ42_001547	Basic helix-loop-helix transcription factor amos. (287 aa)
	APZ42_020030	Protein atonal-like protein. (642 aa)
	APZ42_015653	Neuronal PAS domain-containing protein. (908 aa)
	APZ42_014980	Putative Hypoxia inducible factor-1 alpha. (319 aa)
	APZ42_015061	Helix-loop-helix delilah-like protein. (322 aa)
	APZ42_014784	Neurogenic differentiation factor 4-like protein. (319 aa)
	APZ42_014785	Myc, dMyc-like protein. (178 aa)
	APZ42_013368	Putative Achaete-scute. (169 aa)
	APZ42_013351	Sterol regulatory element-binding protein 1. (1161 aa)
	APZ42_012209	Putative Myogenic factor 6. (316 aa)
	APZ42_002304	Trachealess protein. (105 aa)
	APZ42_034176	Putative Class B basic helix-loop-helix protein. (225 aa)
	APZ42_033598	Aryl hydrocarbon receptor nuclear translocator protein 1. (946 aa)
	APZ42_032692	BHLH domain-containing protein. (562 aa)
	APZ42_032439	Putative Salivary gland-expressed bHLH. (566 aa)
	APZ42_032376	BHLH domain-containing protein. (901 aa)
	APZ42_031138	Uncharacterized protein. (315 aa)
	APZ42_029061	Class E basic helix-loop-helix 40-like protein. (367 aa)
	APZ42_029032	E region transcript mgamma. (216 aa)
	APZ42_026815	Class E basic helix-loop-helix 41-like protein. (753 aa)
	APZ42_026870	BHLH domain-containing protein. (276 aa)
	APZ42_024081	Extra macrochaetae-like protein. (153 aa)
	APZ42_023386	Putative Daughterless protein. (68 aa)
	APZ42_023139	Putative Transcription factor 23. (130 aa)
	APZ42_022480	BHLH domain-containing protein. (132 aa)
	APZ42_022531	Upstream stimulatory factor 2-like protein. (431 aa)
	APZ42_022621	Max dimerization protein 1. (244 aa)
	APZ42_020897	Neuronal PAS domain-containing protein. (87 aa)
	APZ42_020564	Single-minded 1-A. (897 aa)
	APZ42_020820	Putative Helix-loop-helix protein 1. (131 aa)
	APZ42_020324	Putative Transcription factor HES-2. (590 aa)
	APZ42_016999	Achaete-scute complex protein T3. (291 aa)
	APZ42_019459	Hairy enhancer of split-like 1. (235 aa)
	APZ42_016998	BHLH domain-containing protein. (406 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001547	APZ42_023386	A0A0P6DAG7	A0A164UZQ6	Basic helix-loop-helix transcription factor amos.	Putative Daughterless protein.	0.650
APZ42_002304	APZ42_015653	A0A164ICX5	A0A162NSW5	Trachealess protein.	Neuronal PAS domain-containing protein.	0.730
APZ42_002304	APZ42_020897	A0A164ICX5	A0A164X507	Trachealess protein.	Neuronal PAS domain-containing protein.	0.730
APZ42_002304	APZ42_022531	A0A164ICX5	A0A164VK34	Trachealess protein.	Upstream stimulatory factor 2-like protein.	0.730
APZ42_002304	APZ42_031138	A0A164ICX5	A0A164N356	Trachealess protein.	Uncharacterized protein.	0.730
APZ42_002304	APZ42_033598	A0A164ICX5	A0A164KXJ8	Trachealess protein.	Aryl hydrocarbon receptor nuclear translocator protein 1.	0.730
APZ42_002304	DmagArnt2	A0A164ICX5	Q1JUI4	Trachealess protein.	Aryl hydrocarbone receptor nuclear translocator.	0.958
APZ42_012209	APZ42_023386	A0A162S6M9	A0A164UZQ6	Putative Myogenic factor 6.	Putative Daughterless protein.	0.925
APZ42_012209	APZ42_024081	A0A162S6M9	A0A164UFV0	Putative Myogenic factor 6.	Extra macrochaetae-like protein.	0.481
APZ42_012209	APZ42_027591	A0A162S6M9	A0A0P5ZT82	Putative Myogenic factor 6.	Extra macrochaetae-like protein.	0.481
APZ42_012996	APZ42_023386	A0A0P5X6E6	A0A164UZQ6	Transcription factor podocyte-expressed 1 pod-1 epicardin capsulin.	Putative Daughterless protein.	0.851
APZ42_012996	APZ42_029061	A0A0P5X6E6	A0A164PY90	Transcription factor podocyte-expressed 1 pod-1 epicardin capsulin.	Class E basic helix-loop-helix 40-like protein.	0.406
APZ42_013351	APZ42_014785	A0A162QXQ0	A0A162PLP0	Sterol regulatory element-binding protein 1.	Myc, dMyc-like protein.	0.794
APZ42_013351	APZ42_016446	A0A162QXQ0	A0A165AF52	Sterol regulatory element-binding protein 1.	BHLH domain-containing protein.	0.794
APZ42_013351	APZ42_017607	A0A162QXQ0	A0A0P5NSQ5	Sterol regulatory element-binding protein 1.	Carbohydrate-responsive element-binding.	0.593
APZ42_013351	APZ42_022621	A0A162QXQ0	A0A164VP50	Sterol regulatory element-binding protein 1.	Max dimerization protein 1.	0.794
APZ42_013351	APZ42_032376	A0A162QXQ0	A0A164M157	Sterol regulatory element-binding protein 1.	BHLH domain-containing protein.	0.794
APZ42_013368	APZ42_023386	A0A162QXL0	A0A164UZQ6	Putative Achaete-scute.	Putative Daughterless protein.	0.820
APZ42_013368	APZ42_024081	A0A162QXL0	A0A164UFV0	Putative Achaete-scute.	Extra macrochaetae-like protein.	0.423
APZ42_013368	APZ42_027591	A0A162QXL0	A0A0P5ZT82	Putative Achaete-scute.	Extra macrochaetae-like protein.	0.423