(35 nodes) CH domain superfamily network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_010846	Spectrin beta chain; Belongs to the spectrin family. (2436 aa)
	APZ42_025380	Guanine nucleotide exchange factor VAV2. (546 aa)
	APZ42_025360	Leucine-rich repeat and calponin domain-containing protein. (878 aa)
	APZ42_033476	Microtubule-associated protein RP/EB family member. (291 aa)
	APZ42_016042	Golgi-associated microtubule-binding protein hook3. (734 aa)
	APZ42_019739	Spectrin domain with coiled-coils 1 (SPECC1), transcript variant, mRNA protein. (806 aa)
	APZ42_011385	Putative Pickled eggs protein. (896 aa)
	APZ42_020914	Spectrin beta chain. (3333 aa)
	APZ42_014550	Protein sickie-like protein. (1933 aa)
	APZ42_015114	Filamin-B. (1510 aa)
	APZ42_015074	Microtubule-actin cross-linking factor 1. (5007 aa)
	APZ42_031172	Girdin. (1617 aa)
	APZ42_028813	Putative MICAL protein 2. (990 aa)
	APZ42_032078	Smoothelin protein 2. (122 aa)
	APZ42_032597	Dystrophin-like protein. (3089 aa)
	APZ42_033506	Transgelin; Belongs to the calponin family. (250 aa)
	APZ42_033594	Paralyzed arrest AT two-FolD protein 6. (291 aa)
	APZ42_002464	Short spindle 4-like protein. (197 aa)
	APZ42_017089	Putative Dystrophin. (218 aa)
	APZ42_017865	Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (181 aa)
	APZ42_018177	Daple protein. (65 aa)
	APZ42_018325	Dixin. (459 aa)
	APZ42_018312	Muscle-specific protein. (5333 aa)
	APZ42_019119	Calponin-homology (CH) domain-containing protein. (123 aa)
	APZ42_020457	Transgelin. (84 aa)
	APZ42_011395	GAS2 1-like protein. (476 aa)
	APZ42_021342	Filamin-B. (1034 aa)
	APZ42_022330	Guanine nucleotide exchange factor VAV3. (805 aa)
	APZ42_026918	Plastin-3. (507 aa)
	APZ42_027908	Myophilin. (169 aa)
	APZ42_028326	Ras GTPase-activating IQGAP3-like protein. (1613 aa)
	APZ42_012091	Putative EH domain-binding protein 1. (865 aa)
	APZ42_028737	Jitterbug. (2881 aa)
	APZ42_013827	Alpha-actinin, sarcomeric. (895 aa)
	APZ42_014476	Putative LIM domain-containing protein 2. (2301 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_002464	APZ42_015074	A0A164I8Y6	A0A162P6X1	Short spindle 4-like protein.	Microtubule-actin cross-linking factor 1.	0.552
APZ42_010846	APZ42_015074	A0A0P5C5W3	A0A162P6X1	Spectrin beta chain; Belongs to the spectrin family.	Microtubule-actin cross-linking factor 1.	0.627
APZ42_011385	APZ42_028326	A0A0P6ANM7	A0A164QQ08	Putative Pickled eggs protein.	Ras GTPase-activating IQGAP3-like protein.	0.434
APZ42_011385	APZ42_033476	A0A0P6ANM7	A0A0P5UP57	Putative Pickled eggs protein.	Microtubule-associated protein RP/EB family member.	0.483
APZ42_011395	APZ42_014550	A0A162SN11	A0A162PPX1	GAS2 1-like protein.	Protein sickie-like protein.	0.489
APZ42_011395	APZ42_033476	A0A162SN11	A0A0P5UP57	GAS2 1-like protein.	Microtubule-associated protein RP/EB family member.	0.488
APZ42_012091	APZ42_014476	A0A162S2M8	A0A162PTR6	Putative EH domain-binding protein 1.	Putative LIM domain-containing protein 2.	0.597
APZ42_012091	APZ42_014550	A0A162S2M8	A0A162PPX1	Putative EH domain-binding protein 1.	Protein sickie-like protein.	0.430
APZ42_012091	APZ42_020457	A0A162S2M8	A0A164XHY7	Putative EH domain-binding protein 1.	Transgelin.	0.429
APZ42_012091	APZ42_028326	A0A162S2M8	A0A164QQ08	Putative EH domain-binding protein 1.	Ras GTPase-activating IQGAP3-like protein.	0.435
APZ42_012091	APZ42_033594	A0A162S2M8	A0A164KXL9	Putative EH domain-binding protein 1.	Paralyzed arrest AT two-FolD protein 6.	0.655
APZ42_013827	APZ42_014476	A0A162QG52	A0A162PTR6	Alpha-actinin, sarcomeric.	Putative LIM domain-containing protein 2.	0.570
APZ42_013827	APZ42_017089	A0A162QG52	A0A165A1A8	Alpha-actinin, sarcomeric.	Putative Dystrophin.	0.625
APZ42_013827	APZ42_020457	A0A162QG52	A0A164XHY7	Alpha-actinin, sarcomeric.	Transgelin.	0.562
APZ42_013827	APZ42_026918	A0A162QG52	A0A164RVM3	Alpha-actinin, sarcomeric.	Plastin-3.	0.460
APZ42_013827	APZ42_028326	A0A162QG52	A0A164QQ08	Alpha-actinin, sarcomeric.	Ras GTPase-activating IQGAP3-like protein.	0.599
APZ42_013827	APZ42_028813	A0A162QG52	A0A164Q5D4	Alpha-actinin, sarcomeric.	Putative MICAL protein 2.	0.812
APZ42_013827	APZ42_032597	A0A162QG52	A0A164LQP5	Alpha-actinin, sarcomeric.	Dystrophin-like protein.	0.625
APZ42_013827	APZ42_033594	A0A162QG52	A0A164KXL9	Alpha-actinin, sarcomeric.	Paralyzed arrest AT two-FolD protein 6.	0.988
APZ42_014476	APZ42_012091	A0A162PTR6	A0A162S2M8	Putative LIM domain-containing protein 2.	Putative EH domain-binding protein 1.	0.597